RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 EPHA3P29320 983 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 NR1H2P55055 460 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 GJA9P57773 515 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 CEACAM7Q14002 265 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 PRPSAP1Q14558 356 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 MAPRE2Q15555 327 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 DLG2Q15700 870 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 SV2CQ496J9 727 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 CNTN4Q8IWV2 1026 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 SHCBP1Q8NEM2 672 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 ASB9Q96DX5 294 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 TIMMDC1Q9NPL8 285 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 RRN3Q9NYV6 651 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 SUCOQ9UBS9 1254 aaKnown RBP17.98■□□□□ 0.47
RTN4-204ENST00000357732 TRIM38O00635 465 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 HOXA11P31270 313 aaPredicted RBP17.98■□□□□ 0.47
RTN4-204ENST00000357732 GALNT2Q10471 571 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 PPM1LQ5SGD2 360 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 IRAK1BP1Q5VVH5 260 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 CCDC117Q8IWD4 279 aaPredicted RBP17.98■□□□□ 0.47
RTN4-204ENST00000357732 LENG1Q96BZ8 264 aaPredicted RBP17.98■□□□□ 0.47
RTN4-204ENST00000357732 PGAP3Q96FM1 320 aaPredicted RBP17.98■□□□□ 0.47
RTN4-204ENST00000357732 MPP4Q96JB8 637 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 FAR2Q96K12 515 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 C16orf70Q9BSU1 422 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 UBE2OQ9C0C9 1292 aaKnown RBP17.98■□□□□ 0.47
RTN4-204ENST00000357732 VTA1Q9NP79 307 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 IARS2Q9NSE4 1012 aaKnown RBP17.98■□□□□ 0.47
RTN4-204ENST00000357732 CIDEBQ9UHD4 219 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 SLC39A10Q9ULF5 831 aa17.98■□□□□ 0.47
RTN4-204ENST00000357732 GNEQ9Y223 722 aaKnown RBP17.98■□□□□ 0.47
RTN4-204ENST00000357732 RBM47A0AV96 593 aaKnown RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 E2F8A0AVK6 867 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 TK2O00142 265 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 ZBTB24O43167 697 aaPredicted RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 SBK3P0C264 359 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 NPR3P17342 541 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 WARSP23381 471 aaKnown RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 LMO2P25791 158 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 TAF6P49848 677 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 TPI1P60174 286 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 GRM3Q14832 879 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 RBM44Q6ZP01 1051 aaKnown RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 PIWIL4Q7Z3Z4 852 aaKnown RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 TOP6BLQ8N6T0 577 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 B3GALNT2Q8NCR0 500 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 C18orf25Q96B23 403 aaPredicted RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 MAML3Q96JK9 1138 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 MLPHQ9BV36 600 aaPredicted RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 SLC2A11Q9BYW1 496 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 NUF2Q9BZD4 464 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 RNF19AQ9NV58 838 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 ZDHHC2Q9UIJ5 367 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 A0A1B0GVG6 124 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 NEMP1O14524 444 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 AXLP30530 894 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 GMPRP36959 345 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 USP10Q14694 798 aaKnown RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 ARL13BQ3SXY8 428 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 NADK2Q4G0N4 442 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 LRRC8EQ6NSJ5 796 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 ERO1BQ86YB8 467 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 SIX6OS1Q8N1H7 587 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 TMEM102Q8N9M5 508 aaPredicted RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 CEP70Q8NHQ1 597 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 NMD3Q96D46 503 aaKnown RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 HAUS8Q9BT25 410 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 COPS7BQ9H9Q2 264 aaPredicted RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 PIGVQ9NUD9 493 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 ACOT9Q9Y305 439 aa17.97■□□□□ 0.47
RTN4-204ENST00000357732 FNDC1Q4ZHG4 1894 aaPredicted RBP17.97■□□□□ 0.47
RTN4-204ENST00000357732 USP12O75317 370 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 C8BP07358 591 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 SLC35E2BP0CK96 405 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 CD68P34810 354 aaPredicted RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 IREB2P48200 963 aaKnown RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 NAGLUP54802 743 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 DNAJB13P59910 316 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 MYBPC1Q00872 1141 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 GRIK4Q16099 956 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 KIZQ2M2Z5 673 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 CERCAMQ5T4B2 595 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 KLHDC10Q6PID8 442 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 LILRA2Q8N149 483 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 AGR3Q8TD06 166 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 PTCD2Q8WV60 388 aaKnown RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 DUS3LQ96G46 650 aaKnown RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 TEKT5Q96M29 485 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 PPP1R2P1Q96PQ5 205 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 NCKIPSDQ9NZQ3 722 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 H3BRB1 525 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 HUS1O60921 280 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 OR6B1O95007 311 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 ENO3P13929 434 aaPredicted RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 TKTL1P51854 596 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 CCNA1P78396 465 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 MS4A2Q01362 244 aa17.96■□□□□ 0.47
RTN4-204ENST00000357732 TRAP1Q12931 704 aaKnown RBP17.96■□□□□ 0.47
RTN4-204ENST00000357732 STX5Q13190 355 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms