RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 DGKKQ5KSL6 1271 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 TMCO4Q5TGY1 634 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 CCDC137Q6PK04 289 aaKnown RBP25.84■■□□□ 1.73
SSBP3-202ENST00000357475 CNTD1Q8N815 330 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 CCDC114Q96M63 670 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 HOMER3Q9NSC5 361 aa25.84■■□□□ 1.73
SSBP3-202ENST00000357475 TTC24A2A3L6 582 aaPredicted RBP25.83■■□□□ 1.73
SSBP3-202ENST00000357475 ZSCAN5CA6NGD5 496 aaPredicted RBP25.83■■□□□ 1.73
SSBP3-202ENST00000357475 TTC34A8MYJ7 566 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 ASLP04424 464 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 ZSCAN5DPP0CG00 497 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 RGRP47804 291 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 IFI35P80217 286 aaPredicted RBP25.83■■□□□ 1.73
SSBP3-202ENST00000357475 C2orf27AQ580R0 203 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 TEX26Q8N6G2 289 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 TSEN2Q8NCE0 465 aaKnown RBP25.83■■□□□ 1.73
SSBP3-202ENST00000357475 FATE1Q969F0 183 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 ERLEC1Q96DZ1 483 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 EXOC2Q96KP1 924 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 ZNF599Q96NL3 588 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 KRT12Q99456 494 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 IL12RB2Q99665 862 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 TNKS2Q9H2K2 1166 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 RBM22Q9NW64 420 aaKnown RBP eCLIP25.83■■□□□ 1.73
SSBP3-202ENST00000357475 CACNA2D2Q9NY47 1150 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 DRG1Q9Y295 367 aaKnown RBP25.83■■□□□ 1.73
SSBP3-202ENST00000357475 NCOR1O75376 2440 aa25.83■■□□□ 1.73
SSBP3-202ENST00000357475 SGK1O00141 431 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 TIMM44O43615 452 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 HLA-DQB2P05538 268 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 HLA-EP13747 358 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 PRKCHP24723 683 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 IL12RB1P42701 662 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 WASP42768 502 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 MAXP61244 160 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 HNRNPDQ14103 355 aaKnown RBP25.83■■□□□ 1.72
SSBP3-202ENST00000357475 FNDC3BQ53EP0 1204 aaKnown RBP25.83■■□□□ 1.72
SSBP3-202ENST00000357475 ALLCQ8N6M5 410 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 CCDC110Q8TBZ0 833 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 AGAP3Q96P47 875 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 LTB4R2Q9NPC1 389 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 THAP10Q9P2Z0 257 aaPredicted RBP25.83■■□□□ 1.72
SSBP3-202ENST00000357475 LHX3Q9UBR4 397 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 AMACRQ9UHK6 382 aa25.83■■□□□ 1.72
SSBP3-202ENST00000357475 CCDC188H7C350 402 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 RNF40O75150 1001 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 SRPRAP08240 638 aaKnown RBP25.82■■□□□ 1.72
SSBP3-202ENST00000357475 CHRNB1P11230 501 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 CHRNA3P32297 505 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 MMP13P45452 471 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 FZD5Q13467 585 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 UBXN2BQ14CS0 331 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 DLG2Q15700 870 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 MARC1Q5VT66 337 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 Q6ZS52 159 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 CCDC105Q8IYK2 499 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 ZNF567Q8N184 647 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.82■■□□□ 1.72
SSBP3-202ENST00000357475 ZNF513Q8N8E2 541 aaPredicted RBP25.82■■□□□ 1.72
SSBP3-202ENST00000357475 FRS2Q8WU20 508 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 TM6SF2Q9BZW4 377 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 TBC1D17Q9HA65 648 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 NT5MQ9NPB1 228 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 PLA2G4CQ9UP65 541 aa25.82■■□□□ 1.72
SSBP3-202ENST00000357475 KANSL1LA0AUZ9 987 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 F5H423 210 aaPredicted RBP25.81■■□□□ 1.72
SSBP3-202ENST00000357475 ZBTB24O43167 697 aaPredicted RBP25.81■■□□□ 1.72
SSBP3-202ENST00000357475 PDGFBP01127 241 aaPredicted RBP25.81■■□□□ 1.72
SSBP3-202ENST00000357475 PTGIRP43119 386 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 FNTAP49354 379 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 ACCSLQ4AC99 568 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 INO80DQ53TQ3 878 aaPredicted RBP25.81■■□□□ 1.72
SSBP3-202ENST00000357475 ATXN7L2Q5T6C5 722 aaPredicted RBP25.81■■□□□ 1.72
SSBP3-202ENST00000357475 C22orf39Q6P5X5 142 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 PKN3Q6P5Z2 889 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 NUDT18Q6ZVK8 323 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 NOA1Q8NC60 698 aaKnown RBP25.81■■□□□ 1.72
SSBP3-202ENST00000357475 ATL2Q8NHH9 583 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 UCMAQ8WVF2 138 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 EXOC4Q96A65 974 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 NSMCE3Q96MG7 304 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 CINPQ9BW66 212 aaPredicted RBP25.81■■□□□ 1.72
SSBP3-202ENST00000357475 TMEM245Q9H330 911 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 POLR3BQ9NW08 1133 aaPredicted RBP25.81■■□□□ 1.72
SSBP3-202ENST00000357475 TTLL3Q9Y4R7 772 aa25.81■■□□□ 1.72
SSBP3-202ENST00000357475 ATP9BO43861 1147 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 IFNB1P01574 187 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 CD68P34810 354 aaPredicted RBP25.8■■□□□ 1.72
SSBP3-202ENST00000357475 RENBPP51606 427 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 SLC20A2Q08357 652 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 RFTN1Q14699 578 aaPredicted RBP25.8■■□□□ 1.72
SSBP3-202ENST00000357475 TRIP13Q15645 432 aaPredicted RBP25.8■■□□□ 1.72
SSBP3-202ENST00000357475 TEX44Q53QW1 395 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 Q6ZVU0 165 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 NSMCE1Q8WV22 266 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 EDAQ92838 391 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 RTP4Q96DX8 246 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 SHDQ96IW2 340 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 NEU2Q9Y3R4 380 aa25.8■■□□□ 1.72
SSBP3-202ENST00000357475 STON1Q9Y6Q2 735 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms