RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 C5orf42Q9H799 3197 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 SYNJ2BP-COX16A0A087WUM0 186 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 SMIM31A0A1B0GVY4 71 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 HMX2A2RU54 273 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 MTMR11A4FU01 709 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 FAM159BA6NKW6 160 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 HHLA1C9JL84 531 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 H7C4K7 107 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 ATP9BO43861 1147 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 EFEMP2O95967 443 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 GSRP00390 522 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 SPATA31D3P0C874 917 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 TFE3P19532 575 aaPredicted RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 GRIA2P42262 883 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 SFT2D3Q587I9 215 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 SPATA31D4Q6ZUB0 917 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 CAND1Q86VP6 1230 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 RNF168Q8IYW5 571 aaPredicted RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 TAB3Q8N5C8 712 aaPredicted RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 PIP4K2CQ8TBX8 421 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 RXFP2Q8WXD0 754 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 KHSRPQ92945 711 aaKnown RBP eCLIP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 HSFY1Q96LI6 401 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 MTIF3Q9H2K0 278 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 COX16Q9P0S2 106 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 PCDHB5Q9Y5E4 795 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 MYO16Q9Y6X6 1858 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 ZNF638Q14966 1978 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 TRANK1O15050 2925 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 OR6C75A6NL08 312 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 KRT38O76015 456 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 KLHL2O95198 593 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 VNN2O95498 520 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 BAG2O95816 211 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 APOEP02649 317 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 URODP06132 367 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 CA3P07451 260 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 PBX2P40425 430 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 MAGEA3P43357 314 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 CLCN2P51788 898 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 NRLP54845 237 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 ALDH18A1P54886 795 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 STX3Q13277 289 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 CCNIQ14094 377 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 NFE2Q16621 373 aaPredicted RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 TBC1D25Q3MII6 688 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 CYS1Q717R9 158 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 RASSF3Q86WH2 238 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 KCTD6Q8NC69 237 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 MCUQ8NE86 351 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 NAT14Q8WUY8 206 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 HSPH1Q92598 858 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 FAF2Q96CS3 445 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 BTBD9Q96Q07 612 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 EBF4Q9BQW3 602 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 UBE2OQ9C0C9 1292 aaKnown RBP12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 CSNK1G1Q9HCP0 422 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 MTRRQ9UBK8 725 aa12.92□□□□□ -0.34
RTFDC1-202ENST00000357348 EYSQ5T1H1 3165 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 LINC01553A4QN01 128 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 YJEFN3A6XGL0 299 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 TBC1D4O60343 1298 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 AVILO75366 819 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 MIPP30301 263 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 ACADSBP45954 432 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 SERPINB9P50453 376 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 SLC5A3P53794 718 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 GPR17Q13304 367 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 MED21Q13503 144 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 ITGA9Q13797 1035 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 UBAP2LQ14157 1087 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 CYP4V2Q6ZWL3 525 aaPredicted RBP12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 TMC7Q7Z402 723 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 DDX53Q86TM3 631 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 FAM81AQ8TBF8 368 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 ACTRT2Q8TDY3 377 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 GIPC2Q8TF65 315 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 EDEM1Q92611 657 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 ZNF778Q96MU6 729 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 KLHL4Q9C0H6 718 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 XAB2Q9HCS7 855 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 ATXN10Q9UBB4 475 aa12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 ZC3H7BQ9UGR2 993 aaKnown RBP12.91□□□□□ -0.34
RTFDC1-202ENST00000357348 CSH1P0DML2 217 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 CSH2P0DML3 217 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 MYL4P12829 197 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 ALOX15P16050 662 aaPredicted RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 GPD1P21695 349 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 ATXN1P54253 815 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 TFDP2Q14188 446 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 DARS2Q6PI48 645 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 CTAGE3PQ8IX95 158 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 SHKBP1Q8TBC3 707 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 PHOSPHO2Q8TCD6 241 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 KCTD13Q8WZ19 329 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 CLP1Q92989 425 aaKnown RBP12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 CFAP36Q96G28 342 aa12.9□□□□□ -0.34
RTFDC1-202ENST00000357348 CALN1Q9BXU9 219 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms