RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 LINC00471Q8N535 108 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 TAB3Q8N5C8 712 aaPredicted RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 HSFY1Q96LI6 401 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 CRAMP1Q96RY5 1269 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PUS3Q9BZE2 481 aaKnown RBP6.66□□□□□ -1.34
VPS13B-202ENST00000357162 RHOJQ9H4E5 214 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 FAM49BQ9NUQ9 324 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PTTG3PQ9NZH4 202 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 EHD3Q9NZN3 535 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 PSME2Q9UL46 239 aa6.66□□□□□ -1.34
VPS13B-202ENST00000357162 ATP6V1G1O75348 118 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 PLEKP08567 350 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 CASP4P49662 377 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 HSF2Q03933 536 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 PLEKHG6Q3KR16 790 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 EIF3MQ7L2H7 374 aaKnown RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 TTC7BQ86TV6 843 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 ZNF507Q8TCN5 953 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SHC3Q92529 594 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 RIOX1Q9H6W3 641 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 NPHP4O75161 1426 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 A0A087WWV3 80 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 NR5A2O00482 541 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SUPT7LO94864 414 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 CYBBP04839 570 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 PROZP22891 400 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 IL5RAQ01344 420 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 FOLH1Q04609 750 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 FBXO39Q8N4B4 442 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 ZFP28Q8NHY6 868 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 NUSAP1Q9BXS6 441 aaKnown RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 UNC93B1Q9H1C4 597 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 NID2Q14112 1375 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 ZGRF1Q86YA3 2104 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 CHD3Q12873 2000 aaKnown RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SYNJ2BP-COX16A0A087WUM0 186 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SCELO95171 688 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 ITIH1P19827 911 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 RPS12P25398 132 aaKnown RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 RFTN1Q14699 578 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 RHBDF1Q96CC6 855 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 KIFC1Q9BW19 673 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 HHATLQ9HCP6 504 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 NDFIP2Q9NV92 336 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 COX16Q9P0S2 106 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 PRR12Q9ULL5 1215 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SAMD4AQ9UPU9 718 aaKnown RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 PCDHGB1Q9Y5G3 927 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SERPINF2P08697 491 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 ADGRG6Q86SQ4 1221 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 NATD1Q8N6N6 113 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 KIF12Q96FN5 646 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 EPB41L4AQ9HCS5 686 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 MKL2Q9ULH7 1088 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 MAGED1Q9Y5V3 778 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 VBP1P61758 197 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 INTS6LQ5JSJ4 861 aaKnown RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 C10orf107Q8IVU9 208 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 TCAIMQ8N3R3 496 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 DPF2Q92785 391 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 CDRT15Q96T59 188 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SIK2Q9H0K1 926 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 ANKRA2Q9H9E1 313 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SNX6Q9UNH7 406 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 RGS14O43566 566 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SLC11A2P49281 568 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 KCNJ2P63252 427 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 TSTA3Q13630 321 aaPredicted RBP6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SLITRK4Q8IW52 837 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 MXRA8Q9BRK3 442 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 DCUN1D5Q9BTE7 237 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 ST6GALNAC4Q9H4F1 302 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 POLR1BQ9H9Y6 1135 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 COQ6Q9Y2Z9 468 aa6.65□□□□□ -1.34
VPS13B-202ENST00000357162 SYTL3Q4VX76 610 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 SZRD1Q7Z422 152 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 CELF4Q9BZC1 486 aaKnown RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 CNOT11Q9UKZ1 510 aaKnown RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 MST1RQ04912 1400 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 SLIT3O75094 1523 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 A0A096LPK6 155 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 BTBD19C9JJ37 291 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 RPS6KA4O75676 772 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 AKAP3O75969 853 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 C8BP07358 591 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 TPSB2P20231 275 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 GPD2P43304 727 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 TPSAB1Q15661 275 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 NR4A3Q92570 626 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 COPZ2Q9P299 210 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 DUSP12Q9UNI6 340 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 SSR3Q9UNL2 185 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 TP53BP1Q12888 1972 aaPredicted RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 DCXO43602 365 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 ACADLP28330 430 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 TMBIM6P55061 237 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 BST2Q10589 180 aaKnown RBP6.65□□□□□ -1.35
VPS13B-202ENST00000357162 GRM3Q14832 879 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 NR6A1Q15406 480 aa6.65□□□□□ -1.35
VPS13B-202ENST00000357162 EMC1Q8N766 993 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms