RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 CATSPERZQ9NTU4 200 aa15.04■□□□□ -0
CHD4-201ENST00000357008 TIMM13Q9Y5L4 95 aaPredicted RBP15.04■□□□□ -0
CHD4-201ENST00000357008 ALOX15BO15296 676 aa15.04■□□□□ -0
CHD4-201ENST00000357008 CBFA2T3O75081 653 aa15.04■□□□□ -0
CHD4-201ENST00000357008 NOS2P35228 1153 aa15.04■□□□□ -0
CHD4-201ENST00000357008 CDC42P60953 191 aa15.04■□□□□ -0
CHD4-201ENST00000357008 EN1Q05925 392 aaPredicted RBP15.04■□□□□ -0
CHD4-201ENST00000357008 INTS11Q5TA45 600 aaKnown RBP15.04■□□□□ -0
CHD4-201ENST00000357008 NKAPQ8N5F7 415 aaKnown RBP15.04■□□□□ -0
CHD4-201ENST00000357008 VPS45Q9NRW7 570 aa15.04■□□□□ -0
CHD4-201ENST00000357008 ASTN1O14525 1302 aa15.04■□□□□ -0
CHD4-201ENST00000357008 CEP170BQ9Y4F5 1589 aaPredicted RBP15.04■□□□□ -0
CHD4-201ENST00000357008 H7C0S8 307 aa15.03■□□□□ -0
CHD4-201ENST00000357008 WARSP23381 471 aaKnown RBP15.03■□□□□ -0
CHD4-201ENST00000357008 JAK1P23458 1154 aa15.03■□□□□ -0
CHD4-201ENST00000357008 MARCKSL1P49006 195 aa15.03■□□□□ -0
CHD4-201ENST00000357008 NPNTQ6UXI9 565 aa15.03■□□□□ -0
CHD4-201ENST00000357008 PLEKHH3Q7Z736 793 aa15.03■□□□□ -0
CHD4-201ENST00000357008 REPS2Q8NFH8 660 aa15.03■□□□□ -0
CHD4-201ENST00000357008 WNT8BQ93098 351 aa15.03■□□□□ -0
CHD4-201ENST00000357008 RNF157Q96PX1 679 aa15.03■□□□□ -0
CHD4-201ENST00000357008 FAM126AQ9BYI3 521 aaPredicted RBP15.03■□□□□ -0
CHD4-201ENST00000357008 TMEM150BA6NC51 233 aa15.03■□□□□ -0
CHD4-201ENST00000357008 CCDC166P0CW27 439 aa15.03■□□□□ -0
CHD4-201ENST00000357008 GABRB2P47870 512 aa15.03■□□□□ -0
CHD4-201ENST00000357008 CLCN5P51795 746 aa15.03■□□□□ -0
CHD4-201ENST00000357008 BOP1Q14137 746 aaKnown RBP15.03■□□□□ -0
CHD4-201ENST00000357008 ZSWIM7Q19AV6 140 aa15.03■□□□□ -0
CHD4-201ENST00000357008 FOXR2Q6PJQ5 311 aa15.03■□□□□ -0
CHD4-201ENST00000357008 SLC9A9Q8IVB4 645 aa15.03■□□□□ -0
CHD4-201ENST00000357008 SHC3Q92529 594 aa15.03■□□□□ -0
CHD4-201ENST00000357008 DNAJC19Q96DA6 116 aa15.03■□□□□ -0
CHD4-201ENST00000357008 MARK4Q96L34 752 aa15.03■□□□□ -0
CHD4-201ENST00000357008 TCF12Q99081 682 aa15.03■□□□□ -0
CHD4-201ENST00000357008 SLITRK2Q9H156 845 aa15.03■□□□□ -0
CHD4-201ENST00000357008 MORF4L1Q9UBU8 362 aa15.03■□□□□ -0
CHD4-201ENST00000357008 RPS6KA6Q9UK32 745 aa15.03■□□□□ -0
CHD4-201ENST00000357008 AP4B1Q9Y6B7 739 aa15.03■□□□□ -0
CHD4-201ENST00000357008 FRMPD1Q5SYB0 1578 aa15.03■□□□□ -0
CHD4-201ENST00000357008 NKRFO15226 690 aaKnown RBP eCLIP15.03■□□□□ -0
CHD4-201ENST00000357008 YWHAQP27348 245 aa15.03■□□□□ -0
CHD4-201ENST00000357008 ABCG1P45844 678 aa15.03■□□□□ -0
CHD4-201ENST00000357008 IDH2P48735 452 aaKnown RBP15.03■□□□□ -0
CHD4-201ENST00000357008 RIPK1Q13546 671 aa15.03■□□□□ -0
CHD4-201ENST00000357008 SLC41A1Q8IVJ1 513 aa15.03■□□□□ -0
CHD4-201ENST00000357008 KBTBD8Q8NFY9 601 aa15.03■□□□□ -0
CHD4-201ENST00000357008 CAPSLQ8WWF8 208 aa15.03■□□□□ -0
CHD4-201ENST00000357008 EBNA1BP2Q99848 306 aaKnown RBP15.03■□□□□ -0
CHD4-201ENST00000357008 CLK4Q9HAZ1 481 aaKnown RBP15.03■□□□□ -0
CHD4-201ENST00000357008 KCNMB3Q9NPA1 279 aa15.03■□□□□ -0
CHD4-201ENST00000357008 TSPAN3O60637 253 aa15.03■□□□□ -0
CHD4-201ENST00000357008 BMP10O95393 424 aa15.03■□□□□ -0
CHD4-201ENST00000357008 TRUB2O95900 331 aaKnown RBP15.03■□□□□ -0
CHD4-201ENST00000357008 CAPN1P07384 714 aa15.03■□□□□ -0
CHD4-201ENST00000357008 MZT2AQ6P582 158 aa15.03■□□□□ -0
CHD4-201ENST00000357008 FAM180AQ6UWF9 173 aa15.03■□□□□ -0
CHD4-201ENST00000357008 PHF13Q86YI8 300 aaPredicted RBP15.03■□□□□ -0
CHD4-201ENST00000357008 SLC4A5Q9BY07 1137 aa15.03■□□□□ -0
CHD4-201ENST00000357008 ELOVL4Q9GZR5 314 aa15.03■□□□□ -0
CHD4-201ENST00000357008 POLR1EQ9GZS1 481 aaKnown RBP15.03■□□□□ -0
CHD4-201ENST00000357008 TISP43B9A030 160 aa15.03■□□□□ -0
CHD4-201ENST00000357008 COX7A2P14406 83 aa15.03■□□□□ -0
CHD4-201ENST00000357008 VAV1P15498 845 aa15.03■□□□□ -0
CHD4-201ENST00000357008 MMP14P50281 582 aa15.03■□□□□ -0
CHD4-201ENST00000357008 FMO1Q01740 532 aa15.03■□□□□ -0
CHD4-201ENST00000357008 C15orf59Q2T9L4 293 aaPredicted RBP15.03■□□□□ -0
CHD4-201ENST00000357008 DGCR14Q96DF8 476 aaKnown RBP15.03■□□□□ -0
CHD4-201ENST00000357008 TMEM134Q9H6X4 195 aa15.03■□□□□ -0
CHD4-201ENST00000357008 GMPPBQ9Y5P6 360 aa15.03■□□□□ -0
CHD4-201ENST00000357008 GTF2BQ00403 316 aa15.02■□□□□ -0
CHD4-201ENST00000357008 GRIK4Q16099 956 aa15.02■□□□□ -0
CHD4-201ENST00000357008 SLC5A9Q2M3M2 681 aa15.02■□□□□ -0
CHD4-201ENST00000357008 ZIK1Q3SY52 487 aaPredicted RBP15.02■□□□□ -0
CHD4-201ENST00000357008 KRT74Q7RTS7 529 aa15.02■□□□□ -0
CHD4-201ENST00000357008 PTGR2Q8N8N7 351 aaPredicted RBP15.02■□□□□ -0
CHD4-201ENST00000357008 FAM81AQ8TBF8 368 aa15.02■□□□□ -0
CHD4-201ENST00000357008 MYDGFQ969H8 173 aa15.02■□□□□ -0
CHD4-201ENST00000357008 ACE2Q9BYF1 805 aaPredicted RBP15.02■□□□□ -0
CHD4-201ENST00000357008 ZCCHC2Q9C0B9 1178 aaKnown RBP15.02■□□□□ -0
CHD4-201ENST00000357008 EPB41L1Q9H4G0 881 aa15.02■□□□□ -0
CHD4-201ENST00000357008 PRKAG3Q9UGI9 489 aa15.02■□□□□ -0
CHD4-201ENST00000357008 SNCAIPQ9Y6H5 919 aa15.02■□□□□ -0
CHD4-201ENST00000357008 TAL1P17542 331 aaPredicted RBP15.02■□□□□ -0
CHD4-201ENST00000357008 DGKAP23743 735 aa15.02■□□□□ -0
CHD4-201ENST00000357008 AXLP30530 894 aa15.02■□□□□ -0
CHD4-201ENST00000357008 CYP2C18P33260 490 aa15.02■□□□□ -0
CHD4-201ENST00000357008 CCT3P49368 545 aaKnown RBP15.02■□□□□ -0
CHD4-201ENST00000357008 USP46P62068 366 aa15.02■□□□□ -0
CHD4-201ENST00000357008 GORASP1Q9BQQ3 440 aa15.02■□□□□ -0
CHD4-201ENST00000357008 MAPRE3Q9UPY8 281 aa15.02■□□□□ -0
CHD4-201ENST00000357008 USP20Q9Y2K6 914 aa15.02■□□□□ -0
CHD4-201ENST00000357008 CLUHO75153 1309 aa15.02■□□□□ -0
CHD4-201ENST00000357008 NWD1Q149M9 1564 aa15.02■□□□□ -0
CHD4-201ENST00000357008 ZBTB14O43829 449 aa15.02■□□□□ -0
CHD4-201ENST00000357008 RNASEH1O60930 286 aaKnown RBP15.02■□□□□ -0
CHD4-201ENST00000357008 MLYCDO95822 493 aa15.02■□□□□ -0
CHD4-201ENST00000357008 EPHB3P54753 998 aa15.02■□□□□ -0
CHD4-201ENST00000357008 SFSWAPQ12872 951 aaKnown RBP15.02■□□□□ -0
CHD4-201ENST00000357008 TRMT11Q7Z4G4 463 aaKnown RBP15.02■□□□□ -0
CHD4-201ENST00000357008 POC5Q8NA72 575 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms