RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 DNAJC3Q13217 504 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 SYCP1Q15431 976 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 C2CD6Q53TS8 623 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 OTUD1Q5VV17 481 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-204ENST00000356316 NAA35Q5VZE5 725 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 RWDD4Q6NW29 188 aaKnown RBP10.89□□□□□ -0.67
CAPN3-204ENST00000356316 FBXL19Q6PCT2 694 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 ERN2Q76MJ5 926 aaKnown RBP10.89□□□□□ -0.67
CAPN3-204ENST00000356316 FAM131BQ86XD5 332 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 SPATS2Q86XZ4 545 aaKnown RBP10.89□□□□□ -0.67
CAPN3-204ENST00000356316 MARCH9Q86YJ5 346 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 DRC7Q8IY82 874 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 ZNF683Q8IZ20 524 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 RYBPQ8N488 228 aaPredicted RBP10.89□□□□□ -0.67
CAPN3-204ENST00000356316 ANKRD20A12PQ8NF67 263 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 FAM174AQ8TBP5 190 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 GRIN3AQ8TCU5 1115 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 HNRNPLLQ8WVV9 542 aaKnown RBP10.89□□□□□ -0.67
CAPN3-204ENST00000356316 KLK6Q92876 244 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 FEM1CQ96JP0 617 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 PSMB7Q99436 277 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 HDAC8Q9BY41 377 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 CEP44Q9C0F1 390 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 TMPRSS4Q9NRS4 437 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 TAB2Q9NYJ8 693 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 PPARGC1AQ9UBK2 798 aaKnown RBP10.89□□□□□ -0.67
CAPN3-204ENST00000356316 OR12D3Q9UGF7 316 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 TMEM59LQ9UK28 342 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 RAXQ9Y2V3 346 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 GPSM3Q9Y4H4 160 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 ADAMTS20P59510 1910 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 CABIN1Q9Y6J0 2220 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 KNL1Q8NG31 2342 aa10.89□□□□□ -0.67
CAPN3-204ENST00000356316 LAMA5O15230 3695 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 LEFTY1O75610 366 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 CTSLP07711 333 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 PRLRP16471 622 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 CKMT2P17540 419 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 HNRNPA2B1P22626 353 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 GEMIN4P57678 1058 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 TAS2R38P59533 333 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 POLR2FP61218 127 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 RPS21P63220 83 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 NOMO3P69849 1222 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 CDR2Q01850 454 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 GNA12Q03113 381 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 SGCGQ13326 291 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 ITPR1Q14643 2758 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 CDO1Q16878 200 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 CARD16Q5EG05 197 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 PIP5KL1Q5T9C9 394 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 DPY19L2P1Q6NXN4 242 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 C22orf39Q6P5X5 142 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 TRIM72Q6ZMU5 477 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 DPY19L3Q6ZPD9 716 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 HORMAD1Q86X24 394 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 DCP2Q8IU60 420 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 PCDH20Q8N6Y1 951 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 CHST14Q8NCH0 376 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 OR7D4Q8NG98 312 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 ENOX1Q8TC92 643 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 EPS8L1Q8TE68 723 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 MYOCQ99972 504 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 HEPHQ9BQS7 1158 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 CALN1Q9BXU9 219 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 RETREG1Q9H6L5 497 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 METTL5Q9NRN9 209 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 FAM207AQ9NSI2 230 aaPredicted RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 KLHL11Q9NVR0 708 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 IPO11Q9UI26 975 aaKnown RBP10.88□□□□□ -0.67
CAPN3-204ENST00000356316 DAAM1Q9Y4D1 1078 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 AK5Q9Y6K8 562 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 DOCK9Q9BZ29 2069 aa10.88□□□□□ -0.67
CAPN3-204ENST00000356316 DOCK4Q8N1I0 1966 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 ANKRD62A6NC57 917 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 NEMP2A6NFY4 417 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 I6L893 689 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-204ENST00000356316 NEMP1O14524 444 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 SDC3O75056 442 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 ALPPL2P10696 532 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 KRT3P12035 628 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 MMP8P22894 467 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 GLDCP23378 1020 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 L1CAMP32004 1257 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 ADRA1BP35368 520 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 SOX5P35711 763 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 STAT1P42224 750 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 ACADVLP49748 655 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 SERPINH1P50454 418 aaKnown RBP10.87□□□□□ -0.67
CAPN3-204ENST00000356316 NEK3P51956 506 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 DAB2P98082 770 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 E2F1Q01094 437 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 TARDBPQ13148 414 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN3-204ENST00000356316 ZNF211Q13398 564 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-204ENST00000356316 CAMK2BQ13554 666 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 POLD3Q15054 466 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-204ENST00000356316 COL28A1Q2UY09 1125 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 ZNF284Q2VY69 593 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 SFMBT2Q5VUG0 894 aa10.87□□□□□ -0.67
CAPN3-204ENST00000356316 KIAA1161Q6NSJ0 714 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms