RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 GPSM1Q86YR5 675 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 RAET1EQ8TD07 263 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 BORCS5Q969J3 196 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ZNF512BQ96KM6 892 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 NDNQ99608 321 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 ABCG8Q9H221 673 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 CLK4Q9HAZ1 481 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 RBM22Q9NW64 420 aaKnown RBP eCLIP11.17□□□□□ -0.625e-6■■■■■ 33.5
GTF3C1-201ENST00000356183 PCDHA11Q9Y5I1 949 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC12A8A0AV02 714 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 A8MUI8 341 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PCDH8O95206 1070 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 HLA-DQA1Q5Y7H0 255 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 GLB1LQ6UWU2 654 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 Q96MT0 163 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC4A9Q96Q91 983 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 TRPV5Q9NQA5 729 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 PRMT7Q9NVM4 692 aaPredicted RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 MLXQ9UH92 298 aa11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 RPL26L1Q9UNX3 145 aaKnown RBP11.17□□□□□ -0.62
GTF3C1-201ENST00000356183 USP31Q70CQ4 1352 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 OGTO15294 1046 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 PRODHO43272 600 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 TSPAN8P19075 237 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 RPA1P27694 616 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 GP5P40197 560 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 SQLEQ14534 574 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 CKAP2Q8WWK9 683 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC9A6Q92581 669 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC25A23Q9BV35 468 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 LRMDAQ9H2I8 198 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 TRIT1Q9H3H1 467 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 SP140LQ9H930 580 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 SNX7Q9UNH6 387 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 MTF2Q9Y483 593 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 LMTK2Q8IWU2 1503 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 CDC42BPGQ6DT37 1551 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 A0A0U1RQJ8 604 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 MICAL2O94851 1124 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 VTNP04004 478 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 NTRK1P04629 796 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 FAM187BQ17R55 369 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 LPCAT4Q643R3 524 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 ZNF549Q6P9A3 640 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 DOK6Q6PKX4 331 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 HERC6Q8IVU3 1022 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 LSM14AQ8ND56 463 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC38A2Q96QD8 506 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 TBC1D10AQ9BXI6 508 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 ATXN3LQ9H3M9 355 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 KBTBD4Q9NVX7 518 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 MAT2BQ9NZL9 334 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 MORF4L1Q9UBU8 362 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 RBM7Q9Y580 266 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 PCDHA3Q9Y5H8 950 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 AK5Q9Y6K8 562 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 CNTNAP2Q9UHC6 1331 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 TULP4Q9NRJ4 1543 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 FAM172BPA6NC97 362 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 MAGEB2O15479 319 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 MED24O75448 989 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 BMP10O95393 424 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 MUTP22033 750 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 GMFBP60983 142 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 ACOX1Q15067 660 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 TYSND1Q2T9J0 566 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 POLNQ7Z5Q5 900 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC4A5Q9BY07 1137 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 NKIRAS2Q9NYR9 191 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 BTRCQ9Y297 605 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 VAPBO95292 243 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 NADKO95544 446 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 ATP5BP06576 529 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 TKTP29401 623 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 EIF2S3LQ2VIR3 472 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 AP5B1Q2VPB7 878 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 SLC45A4Q5BKX6 768 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 PTCHD4Q6ZW05 846 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 REPS1Q96D71 796 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 KCNH7Q9NS40 1196 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 PNPLA3Q9NST1 481 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 PLCL2Q9UPR0 1127 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 KCNH4Q9UQ05 1017 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 RPL4P36578 427 aaKnown RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 PPP2R2BQ00005 443 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 EDEM1Q92611 657 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 EZH1Q92800 747 aaPredicted RBP11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 COL26A1Q96A83 441 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 TMEM176AQ96HP8 235 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 DMRTB1Q96MA1 342 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 DNPEPQ9ULA0 475 aa11.16□□□□□ -0.62
GTF3C1-201ENST00000356183 A0A087WZ62 844 aa11.15□□□□□ -0.62
GTF3C1-201ENST00000356183 MOXD2PA6NHM9 499 aa11.15□□□□□ -0.62
GTF3C1-201ENST00000356183 CHP2O43745 196 aa11.15□□□□□ -0.62
GTF3C1-201ENST00000356183 NDUFB10O96000 172 aa11.15□□□□□ -0.62
GTF3C1-201ENST00000356183 SNRPB2P08579 225 aaKnown RBP11.15□□□□□ -0.62
GTF3C1-201ENST00000356183 CYP2C9P11712 490 aa11.15□□□□□ -0.62
GTF3C1-201ENST00000356183 GNA13Q14344 377 aa11.15□□□□□ -0.62
GTF3C1-201ENST00000356183 GRB14Q14449 540 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms