RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 ZNF398Q8TD17 642 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 NMD3Q96D46 503 aaKnown RBP12.35□□□□□ -0.43
SIRPA-201ENST00000356025 PANX3Q96QZ0 392 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 ZNF184Q99676 751 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-201ENST00000356025 HNRNPABQ99729 332 aaKnown RBP12.35□□□□□ -0.43
SIRPA-201ENST00000356025 NAT9Q9BTE0 207 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 FLRT1Q9NZU1 646 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 PHIPQ8WWQ0 1821 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 SMIM35A0A1B0GVV1 85 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 HMX2A2RU54 273 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 HACD1B0YJ81 288 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 GIPC1O14908 333 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 TIMM44O43615 452 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 GRK2P25098 689 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 GPR15P49685 360 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 DBN1Q16643 649 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 AGKQ53H12 422 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 CES4AQ5XG92 561 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 C4orf22Q6V702 233 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 CRYBG2Q8N1P7 616 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 C7orf26Q96N11 449 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 IPO11Q9UI26 975 aaKnown RBP12.35□□□□□ -0.43
SIRPA-201ENST00000356025 DSEQ9UL01 958 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 SSC5DA1L4H1 1573 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 COX4I1P13073 169 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 PAMP19021 973 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 CRYBB1P53674 252 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-201ENST00000356025 GRIK3Q13003 919 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 MAP2K5Q13163 448 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 PCLAFQ15004 111 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 NRF1Q16656 503 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 FAM83EQ2M2I3 478 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 FRMD7Q6ZUT3 714 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 C3orf58Q8NDZ4 430 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 SKA2Q8WVK7 121 aaPredicted RBP12.35□□□□□ -0.43
SIRPA-201ENST00000356025 POMKQ9H5K3 350 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 ALG9Q9H6U8 611 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 FAM50BQ9Y247 325 aa12.35□□□□□ -0.43
SIRPA-201ENST00000356025 A8MX80 341 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 PIRO00625 290 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 PTGESO14684 152 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 ELNP15502 786 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 CDC42EP1Q00587 391 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 YWHAHQ04917 246 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 PDAP1Q13442 181 aaKnown RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 ZNF235Q14590 738 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 TRMT5Q32P41 509 aaKnown RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 PITRM1Q5JRX3 1037 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 KIAA0319Q5VV43 1072 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 RAP1GAP2Q684P5 730 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 KLC3Q6P597 504 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 SMG8Q8ND04 991 aaKnown RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 ATP6V1E2Q96A05 226 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 TBL1YQ9BQ87 522 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 LRCH1Q9Y2L9 728 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 SLC12A8A0AV02 714 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 DPYSL4O14531 572 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 CCDC166P0CW27 439 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 FGF3P11487 239 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 CYLC2Q14093 348 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 PSMD5Q16401 504 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 NAPRTQ6XQN6 538 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 SHCBP1Q8NEM2 672 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 ABTB1Q969K4 478 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 SSU72Q9NP77 194 aaKnown RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 DMAP1Q9NPF5 467 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 ZNF180Q9UJW8 692 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 PADI3Q9ULW8 664 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 HDCP19113 662 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 PEX2P28328 305 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 PTCD3Q96EY7 689 aaKnown RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 SERPINI1Q99574 410 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 DHRS4Q9BTZ2 278 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 KATNAL1Q9BW62 490 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 AGO3Q9H9G7 860 aaKnown RBP12.34□□□□□ -0.43
SIRPA-201ENST00000356025 TRPC7Q9HCX4 862 aa12.34□□□□□ -0.43
SIRPA-201ENST00000356025 MYO9BQ13459 2157 aa12.33□□□□□ -0.43
SIRPA-201ENST00000356025 TTC3P53804 2025 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 CAPN8A6NHC0 703 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 TM7SF2O76062 418 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 AP2A1O95782 977 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 F9P00740 461 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 ITGB1P05556 798 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 CNTFP26441 200 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 STX1BP61266 288 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 MRPS6P82932 125 aaKnown RBP12.33□□□□□ -0.44
SIRPA-201ENST00000356025 FUT11Q495W5 492 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 CLEC6AQ6EIG7 209 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 NEPROQ6NW34 567 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 AFAP1L2Q8N4X5 818 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 CXorf38Q8TB03 319 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 NRG4Q8WWG1 115 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 ESAMQ96AP7 390 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 NPY6RQ99463 290 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 RBBP8Q99708 897 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 PTPN18Q99952 460 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 VRTNQ9H8Y1 702 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 NDFIP2Q9NV92 336 aa12.33□□□□□ -0.44
SIRPA-201ENST00000356025 A0A1W2PQH9 124 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms