RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 KIF9Q9HAQ2 790 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 PLK2Q9NYY3 685 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 TEX264Q9Y6I9 313 aa13.87□□□□□ -0.19
HOXA1-202ENST00000355633 GOLGA6L10A6NI86 522 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 ABHD2P08910 425 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 MZF1P28698 734 aaPredicted RBP13.86□□□□□ -0.19
HOXA1-202ENST00000355633 GEMP55040 296 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 ITKQ08881 620 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 ZNF235Q14590 738 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 ANKRD54Q6NXT1 300 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 CAPN12Q6ZSI9 719 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 NPAS3Q8IXF0 933 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 PALM2Q8IXS6 379 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 AGGF1Q8N302 714 aaeCLIP13.86□□□□□ -0.19
HOXA1-202ENST00000355633 BBS5Q8N3I7 341 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 CELF5Q8N6W0 485 aaKnown RBP13.86□□□□□ -0.19
HOXA1-202ENST00000355633 WFDC5Q8TCV5 224 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 SLC25A51Q9H1U9 297 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 UBA2Q9UBT2 640 aaPredicted RBP13.86□□□□□ -0.19
HOXA1-202ENST00000355633 VPS28Q9UK41 221 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 A0A087WUV0 522 aaPredicted RBP13.86□□□□□ -0.19
HOXA1-202ENST00000355633 MT-CYBP00156 380 aaPredicted RBP13.86□□□□□ -0.19
HOXA1-202ENST00000355633 GLDCP23378 1020 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 WEE1P30291 646 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 CSKP41240 450 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 GPX6P59796 221 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 MAXP61244 160 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 RFTN1Q14699 578 aaPredicted RBP13.86□□□□□ -0.19
HOXA1-202ENST00000355633 KRT71Q3SY84 523 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 FYB2Q5VWT5 728 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 NAPEPLDQ6IQ20 393 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 SYCE2Q6PIF2 218 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 IGDCC3Q8IVU1 814 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 OR52K1Q8NGK4 314 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 FEM1AQ9BSK4 669 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 HAUS2Q9NVX0 235 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 CDH23Q9H251 3354 aa13.86□□□□□ -0.19
HOXA1-202ENST00000355633 USP12O75317 370 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CPP00450 1065 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 MYZAPP0CAP1 466 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 TSHRP16473 764 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 OAS2P29728 719 aaKnown RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 SSTR1P30872 391 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 PHBP35232 272 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 SESN2P58004 480 aaPredicted RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 OLIG2Q13516 323 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 RNF43Q68DV7 783 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 C3orf62Q6ZUJ4 267 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 GET4Q7L5D6 327 aaPredicted RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 LINC00523Q86TU6 105 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 TMEM25Q86YD3 366 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 PGBD5Q8N414 524 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 FIBINQ8TAL6 211 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 FGF13Q92913 245 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 OTUB2Q96DC9 234 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 SIGLEC10Q96LC7 697 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CCDC77Q9BR77 488 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 PIH1D1Q9NWS0 290 aaKnown RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 KIAA1522Q9P206 1035 aaPredicted RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 SEPT3Q9UH03 358 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CDH22Q9UJ99 828 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 OR51B4Q9Y5P0 310 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 ACTL7AQ9Y615 435 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 MAD1L1Q9Y6D9 718 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 WNT6Q9Y6F9 365 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 TRANK1O15050 2925 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 GOLGA8KD6RF30 607 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 SLC9A3R1O14745 358 aaPredicted RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 SNAP91O60641 907 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 HOXB8P17481 243 aaPredicted RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 DSC2Q02487 901 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 MPP3Q13368 585 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 ADAM15Q13444 863 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CROCCP2Q86T23 111 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 MPP5Q8N3R9 675 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 DNAAF3Q8N9W5 541 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 DCAF4L2Q8NA75 395 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 IPMKQ8NFU5 416 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 IRF7Q92985 503 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 ALG14Q96F25 216 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 IMP4Q96G21 291 aaKnown RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CFAP36Q96G28 342 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 EBNA1BP2Q99848 306 aaKnown RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 TMEM109Q9BVC6 243 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CINPQ9BW66 212 aaPredicted RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 BBS2Q9BXC9 721 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 ROPN1BQ9BZX4 212 aaPredicted RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 POLR1EQ9GZS1 481 aaKnown RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 LINC00597Q9H2U6 94 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CENPHQ9H3R5 247 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 ROPN1Q9HAT0 212 aaPredicted RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 TMBIM4Q9HC24 238 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CASS4Q9NQ75 786 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 SPHK2Q9NRA0 654 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 LMCD1Q9NZU5 365 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 ZC3H7BQ9UGR2 993 aaKnown RBP13.85□□□□□ -0.19
HOXA1-202ENST00000355633 CLEC4EQ9ULY5 219 aa13.85□□□□□ -0.19
HOXA1-202ENST00000355633 SDR42E2A6NKP2 422 aa13.84□□□□□ -0.19
HOXA1-202ENST00000355633 NEDD8-MDP1E9PL57 170 aa13.84□□□□□ -0.19
HOXA1-202ENST00000355633 AP3B1O00203 1094 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms