RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 TBX22Q9Y458 520 aa11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 KDM5AP29375 1690 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 CCRL2O00421 344 aa11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 GAS2O43903 313 aaKnown RBP11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 THAP5Q7Z6K1 395 aa11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 PPIL6Q8IXY8 311 aa11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 SLC22A8Q8TCC7 542 aa11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 CRISPLD1Q9H336 500 aa11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 NUP50Q9UKX7 468 aa11.65□□□□□ -0.54
NUDCD3-202ENST00000355451 ERBB4Q15303 1308 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 C1orf232A0A0U1RR37 186 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 LRPAP1P30533 357 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 BNIP2Q12982 314 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 LRRC6Q86X45 466 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 CLHC1Q8NHS4 586 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 Q96MT0 163 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 TMEM79Q9BSE2 394 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 UGT2B28Q9BY64 529 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 PNPLA8Q9NP80 782 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 PRDM8Q9NQV8 689 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 ERVK-18Q9QC07 812 aa11.65□□□□□ -0.55
NUDCD3-202ENST00000355451 EYA4O95677 639 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 S100A2P29034 98 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 NFKB2Q00653 900 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 DCTN2Q13561 401 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 COX4I2Q96KJ9 171 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 NIFKQ9BYG3 293 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 OSBPL8Q9BZF1 889 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 GANQ9H2C0 597 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 TLE6Q9H808 572 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 NCKIPSDQ9NZQ3 722 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 VANGL2Q9ULK5 521 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 SNX7Q9UNH6 387 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 CITO14578 2027 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 SLC1A2P43004 574 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 RIDAP52758 137 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 TMC8Q8IU68 726 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 UBE2J2Q8N2K1 259 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 IL12RB2Q99665 862 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 NIF3L1Q9GZT8 377 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 XPNPEP3Q9NQH7 507 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 UGGT2Q9NYU1 1516 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PGRMC2O15173 223 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PAX3P23760 479 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 GMPSP49915 693 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 UBE2R2Q712K3 238 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 MEIOBQ8N635 442 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PI4K2AQ9BTU6 479 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 ZNF518BQ9C0D4 1074 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 COG5Q9UP83 839 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 TBC1D30Q9Y2I9 924 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 LGALS16A8MUM7 142 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 M0R129 80 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PLOD2O00469 737 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 HLA-DRAP01903 254 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 NTRK1P04629 796 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 ORC1Q13415 861 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 TTC7BQ86TV6 843 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 CCDC36Q8IYA8 594 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 CPA6Q8N4T0 437 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 CERKQ8TCT0 537 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 NSMCE2Q96MF7 247 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PDGFDQ9GZP0 370 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PABPC3Q9H361 631 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 NOL6Q9H6R4 1146 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 RBM22Q9NW64 420 aaKnown RBP eCLIP11.64□□□□□ -0.558e-8■□□□□ 9
NUDCD3-202ENST00000355451 LOC102724159A0A0B4J2E5 919 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 IL1AP01583 271 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 S100A3P33764 101 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PWP2Q15269 919 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 ACSM2BQ68CK6 577 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 GPSM1Q86YR5 675 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 SETD9Q8NE22 299 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 METTL6Q8TCB7 284 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 SNX33Q8WV41 574 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 TMEM168Q9H0V1 697 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 TLR7Q9NYK1 1049 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 GABBR2O75899 941 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 FBXO21O94952 628 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 CSTBP04080 98 aaKnown RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 IFNAR1P17181 557 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PRKG2Q13237 762 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 RUNX2Q13950 521 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 ALG10BQ5I7T1 473 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 FAM126BQ8IXS8 530 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 S100ZQ8WXG8 99 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 KCNJ9Q92806 393 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 SEMA4DQ92854 862 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 KLF6Q99612 283 aaPredicted RBP11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 PLGRKTQ9HBL7 147 aa11.64□□□□□ -0.55
NUDCD3-202ENST00000355451 NMT2O60551 498 aa11.63□□□□□ -0.55
NUDCD3-202ENST00000355451 ERAL1O75616 437 aaKnown RBP11.63□□□□□ -0.55
NUDCD3-202ENST00000355451 VIPP01282 170 aa11.63□□□□□ -0.55
NUDCD3-202ENST00000355451 CATP04040 527 aaKnown RBP11.63□□□□□ -0.55
NUDCD3-202ENST00000355451 APODP05090 189 aa11.63□□□□□ -0.55
NUDCD3-202ENST00000355451 SLC2A7Q6PXP3 512 aa11.63□□□□□ -0.55
NUDCD3-202ENST00000355451 IL27RAQ6UWB1 636 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms