RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 GRM3Q14832 879 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 DLG2Q15700 870 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 KCNA10Q16322 511 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 FSCBQ5H9T9 825 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 ATG14Q6ZNE5 492 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 ARHGAP36Q6ZRI8 547 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 SPATA22Q8NHS9 363 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 DNAJC9Q8WXX5 260 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 C1orf74Q96LT6 269 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 CASP8AP2Q9UKL3 1982 aa22.61■■□□□ 1.21
NKX2-1-201ENST00000354822 E2F8A0AVK6 867 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 ACADSP16219 412 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 TUBP50607 506 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 COPAP53621 1224 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 IRF9Q00978 393 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 SLC12A1Q13621 1099 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 FAM26DQ5JW98 314 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 EPGNQ6UW88 154 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 CASP10Q92851 521 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 SERPINB11Q96P15 392 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 SFMBT1Q9UHJ3 866 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 KCNU1A8MYU2 1149 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 NVLO15381 856 aaKnown RBP22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 PAMP19021 973 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 CPOXP36551 454 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 ACTR3P61158 418 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 USP10Q14694 798 aaKnown RBP22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 MUM1Q2TAK8 710 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 SNX30Q5VWJ9 437 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 AFMIDQ63HM1 303 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 ZNF598Q86UK7 904 aaKnown RBP22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 IPMKQ8NFU5 416 aa22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 ILKAPQ9H0C8 392 aaPredicted RBP22.6■■□□□ 1.21
NKX2-1-201ENST00000354822 WASH4PA8MWX3 477 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 CABYRO75952 493 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 MT-CYBP00156 380 aaPredicted RBP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 YY1P25490 414 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 PRDX6P30041 224 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 CCND3P30281 292 aaPredicted RBP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 ADRA1AP35348 466 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 GMPRP36959 345 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 ZYG11AQ6WRX3 759 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 SCD5Q86SK9 330 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 RTL3Q8N8U3 475 aaKnown RBP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 ACE2Q9BYF1 805 aaPredicted RBP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 UBE2OQ9C0C9 1292 aaKnown RBP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 TASP1Q9H6P5 420 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 COG4Q9H9E3 785 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 RBM22Q9NW64 420 aaKnown RBP eCLIP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 DONSONQ9NYP3 566 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 DNAJB4Q9UDY4 337 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 ANGPTL2Q9UKU9 493 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 TBX10O75333 385 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 NEBLO76041 1014 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 AHSGP02765 367 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 SLC2A3P11169 496 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 CST5P28325 142 aaPredicted RBP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 MLLT6P55198 1093 aaPredicted RBP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 CCSAPQ6IQ19 270 aaPredicted RBP22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 DENND5AQ6IQ26 1287 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 PPFIBP2Q8ND30 876 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 FICDQ9BVA6 458 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 C1QTNF1Q9BXJ1 281 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 SLC7A8Q9UHI5 535 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 PCNTO95613 3336 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 PTPRDP23468 1912 aa22.59■■□□□ 1.21
NKX2-1-201ENST00000354822 E9PAM4 449 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 GOLGA8TH3BQL2 631 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 MYCNP04198 464 aaPredicted RBP22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 ITGB1P05556 798 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 ABCG1P45844 678 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 LIPMQ5VYY2 423 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 NAPRTQ6XQN6 538 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 LRRC74BQ6ZQY2 392 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 MON1AQ86VX9 555 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 LMNTD2Q8IXW0 634 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 DCP1BQ8IZD4 617 aaKnown RBP22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 ZNF781Q8N8C0 355 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 GATA5Q9BWX5 397 aaPredicted RBP22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 PRKD2Q9BZL6 878 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 GPAMQ9HCL2 828 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 TCAF1Q9Y4C2 921 aa22.58■■□□□ 1.21
NKX2-1-201ENST00000354822 PATJQ8NI35 1801 aa22.58■■□□□ 1.2
NKX2-1-201ENST00000354822 DDHD2O94830 711 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 NCF2P19878 526 aaPredicted RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 POU6F1Q14863 301 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 TDRD5Q8NAT2 981 aaKnown RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 ACVR1CQ8NER5 493 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 ZNF333Q96JL9 665 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 FSD1LQ9BXM9 530 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 DRC3Q9H069 523 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 TBC1D13Q9NVG8 400 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 RUVBL2Q9Y230 463 aaKnown RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 NOD1Q9Y239 953 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 ACOT9Q9Y305 439 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 RAP2CQ9Y3L5 183 aa22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 MSI1O43347 362 aaKnown RBP22.57■■□□□ 1.2
NKX2-1-201ENST00000354822 EOMESO95936 686 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms