RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 CXCR2P25025 360 aa11□□□□□ -0.65
SND1-201ENST00000354725 NUP107P57740 925 aa11□□□□□ -0.65
SND1-201ENST00000354725 SLC25A11Q02978 314 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 DNAJC3Q13217 504 aa11□□□□□ -0.65
SND1-201ENST00000354725 TMED2Q15363 201 aa11□□□□□ -0.65
SND1-201ENST00000354725 SMU1Q2TAY7 513 aa11□□□□□ -0.65
SND1-201ENST00000354725 ZNF829Q3KNS6 432 aaPredicted RBP11□□□□□ -0.65
SND1-201ENST00000354725 OGFOD2Q6N063 350 aa11□□□□□ -0.65
SND1-201ENST00000354725 NANOGP8Q6NSW7 305 aa11□□□□□ -0.65
SND1-201ENST00000354725 MFSD7Q6UXD7 560 aa11□□□□□ -0.65
SND1-201ENST00000354725 SPOCD1Q6ZMY3 1216 aa11□□□□□ -0.65
SND1-201ENST00000354725 ARMCX2Q7L311 632 aa11□□□□□ -0.65
SND1-201ENST00000354725 CHSY1Q86X52 802 aa11□□□□□ -0.65
SND1-201ENST00000354725 HDAC2Q92769 488 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 IMPG2Q9BZV3 1241 aa11□□□□□ -0.65
SND1-201ENST00000354725 RHBGQ9H310 441 aa11□□□□□ -0.65
SND1-201ENST00000354725 UCKL1Q9NWZ5 548 aa11□□□□□ -0.65
SND1-201ENST00000354725 PLK2Q9NYY3 685 aa11□□□□□ -0.65
SND1-201ENST00000354725 EMC3Q9P0I2 261 aa11□□□□□ -0.65
SND1-201ENST00000354725 PSMC3IPQ9P2W1 217 aaPredicted RBP11□□□□□ -0.65
SND1-201ENST00000354725 VANGL2Q9ULK5 521 aa11□□□□□ -0.65
SND1-201ENST00000354725 POLIQ9UNA4 740 aa11□□□□□ -0.65
SND1-201ENST00000354725 GNEQ9Y223 722 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 TMEM5Q9Y2B1 443 aa11□□□□□ -0.65
SND1-201ENST00000354725 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11□□□□□ -0.65
SND1-201ENST00000354725 SLC12A8A0AV02 714 aa11□□□□□ -0.65
SND1-201ENST00000354725 GOLGA8RI6L899 631 aa11□□□□□ -0.65
SND1-201ENST00000354725 BUD23O43709 281 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 ARHGEF15O94989 841 aa11□□□□□ -0.65
SND1-201ENST00000354725 HMGCRP04035 888 aa11□□□□□ -0.65
SND1-201ENST00000354725 PRKCAP17252 672 aa11□□□□□ -0.65
SND1-201ENST00000354725 ICAM3P32942 547 aa11□□□□□ -0.65
SND1-201ENST00000354725 MLLT6P55198 1093 aaPredicted RBP11□□□□□ -0.65
SND1-201ENST00000354725 C21orf59P57076 290 aa11□□□□□ -0.65
SND1-201ENST00000354725 NLRP11P59045 1033 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 RPL7AP62424 266 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 FOLH1Q04609 750 aa11□□□□□ -0.65
SND1-201ENST00000354725 NFE2Q16621 373 aaPredicted RBP11□□□□□ -0.65
SND1-201ENST00000354725 XKR9Q5GH70 373 aa11□□□□□ -0.65
SND1-201ENST00000354725 BEND5Q7L4P6 421 aa11□□□□□ -0.65
SND1-201ENST00000354725 CLNKQ7Z7G1 428 aa11□□□□□ -0.65
SND1-201ENST00000354725 WDTC1Q8N5D0 677 aa11□□□□□ -0.65
SND1-201ENST00000354725 MCPH1Q8NEM0 835 aa11□□□□□ -0.65
SND1-201ENST00000354725 HPS1Q92902 700 aa11□□□□□ -0.65
SND1-201ENST00000354725 YME1L1Q96TA2 773 aa11□□□□□ -0.65
SND1-201ENST00000354725 KLHL25Q9H0H3 589 aa11□□□□□ -0.65
SND1-201ENST00000354725 ACSS3Q9H6R3 686 aa11□□□□□ -0.65
SND1-201ENST00000354725 RSL24D1Q9UHA3 163 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 PCDHGC3Q9UN70 934 aa11□□□□□ -0.65
SND1-201ENST00000354725 PCDHA10Q9Y5I2 948 aa11□□□□□ -0.65
SND1-201ENST00000354725 TM9SF1O15321 606 aa11□□□□□ -0.65
SND1-201ENST00000354725 TSPAN6O43657 245 aa11□□□□□ -0.65
SND1-201ENST00000354725 KRT6AP02538 564 aa11□□□□□ -0.65
SND1-201ENST00000354725 KRT6BP04259 564 aa11□□□□□ -0.65
SND1-201ENST00000354725 PGRP06401 933 aa11□□□□□ -0.65
SND1-201ENST00000354725 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 CD58P19256 250 aa11□□□□□ -0.65
SND1-201ENST00000354725 CBX5P45973 191 aa11□□□□□ -0.65
SND1-201ENST00000354725 CPT1AP50416 773 aa11□□□□□ -0.65
SND1-201ENST00000354725 MAPK6Q16659 721 aa11□□□□□ -0.65
SND1-201ENST00000354725 CYP2A13Q16696 494 aa11□□□□□ -0.65
SND1-201ENST00000354725 ANO4Q32M45 955 aa11□□□□□ -0.65
SND1-201ENST00000354725 ANKRD20A4Q4UJ75 823 aa11□□□□□ -0.65
SND1-201ENST00000354725 C2CD6Q53TS8 623 aa11□□□□□ -0.65
SND1-201ENST00000354725 SCARA3Q6AZY7 606 aa11□□□□□ -0.65
SND1-201ENST00000354725 ABHD15Q6UXT9 468 aa11□□□□□ -0.65
SND1-201ENST00000354725 STK32CQ86UX6 486 aa11□□□□□ -0.65
SND1-201ENST00000354725 RALGPS2Q86X27 583 aaPredicted RBP11□□□□□ -0.65
SND1-201ENST00000354725 CCDC116Q8IYX3 515 aa11□□□□□ -0.65
SND1-201ENST00000354725 ARFGAP1Q8N6T3 406 aa11□□□□□ -0.65
SND1-201ENST00000354725 RMDN1Q96DB5 314 aa11□□□□□ -0.65
SND1-201ENST00000354725 FAM84AQ96KN4 292 aa11□□□□□ -0.65
SND1-201ENST00000354725 CGRRF1Q99675 332 aa11□□□□□ -0.65
SND1-201ENST00000354725 FAM213AQ9BRX8 229 aa11□□□□□ -0.65
SND1-201ENST00000354725 BTBD10Q9BSF8 475 aa11□□□□□ -0.65
SND1-201ENST00000354725 UPF3AQ9H1J1 476 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 RUBCNLQ9H714 662 aa11□□□□□ -0.65
SND1-201ENST00000354725 VPS37BQ9H9H4 285 aa11□□□□□ -0.65
SND1-201ENST00000354725 LIN28AQ9H9Z2 209 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 CRLF2Q9HC73 371 aa11□□□□□ -0.65
SND1-201ENST00000354725 SAYSD1Q9NPB0 183 aa11□□□□□ -0.65
SND1-201ENST00000354725 SIRT5Q9NXA8 310 aa11□□□□□ -0.65
SND1-201ENST00000354725 FBXL21Q9UKT6 434 aa11□□□□□ -0.65
SND1-201ENST00000354725 SEC23IPQ9Y6Y8 1000 aaKnown RBP11□□□□□ -0.65
SND1-201ENST00000354725 A0A0B4J269 797 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 A0A1W2PPM1 405 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 LACTBL1A8MY62 500 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 ITM2AO43736 263 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 CCDC22O60826 627 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 SULT1C4O75897 302 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 GABBR2O75899 941 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 ESRRBO95718 433 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 GLAP06280 429 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 ZSCAN5DPP0CG00 497 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 KRT5P13647 590 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 CYP2B6P20813 491 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 GLRA2P23416 452 aa10.99□□□□□ -0.65
SND1-201ENST00000354725 TBXAS1P24557 533 aaPredicted RBP10.99□□□□□ -0.65
SND1-201ENST00000354725 CCND3P30281 292 aaPredicted RBP10.99□□□□□ -0.65
SND1-201ENST00000354725 GRK4P32298 578 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms