RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 NPY2RP49146 381 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 PKNOX1P55347 436 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 GALNT2Q10471 571 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 SEPT6Q14141 434 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 ESRP1Q6NXG1 681 aaKnown RBP19.88■□□□□ 0.77
COL13A1-201ENST00000354547 RNF135Q8IUD6 432 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 FBXW8Q8N3Y1 598 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 OR6Y1Q8NGX8 325 aa19.88■□□□□ 0.77
COL13A1-201ENST00000354547 CCDC189A1A4V9 331 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 CRABP2P29373 138 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 LRPAP1P30533 357 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 ADAM17P78536 824 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 ANO4Q32M45 955 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 PGM2L1Q6PCE3 622 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 SDCCAG8Q86SQ7 713 aaPredicted RBP19.87■□□□□ 0.77
COL13A1-201ENST00000354547 ZC3HC1Q86WB0 502 aaKnown RBP19.87■□□□□ 0.77
COL13A1-201ENST00000354547 MYLPFQ96A32 169 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 GBP5Q96PP8 586 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 FICDQ9BVA6 458 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 PRDM16Q9HAZ2 1276 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 TRHDEQ9UKU6 1024 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 MSI1O43347 362 aaKnown RBP19.87■□□□□ 0.77
COL13A1-201ENST00000354547 POMCP01189 267 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 MYL4P12829 197 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 FAM219BQ5XKK7 198 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 SEL1L3Q68CR1 1132 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 TMC7Q7Z402 723 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 FSTL5Q8N475 847 aaPredicted RBP19.87■□□□□ 0.77
COL13A1-201ENST00000354547 ZC3H15Q8WU90 426 aaKnown RBP19.87■□□□□ 0.77
COL13A1-201ENST00000354547 SFMBT1Q9UHJ3 866 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 TTC3P53804 2025 aa19.87■□□□□ 0.77
COL13A1-201ENST00000354547 ENO3P13929 434 aaPredicted RBP19.86■□□□□ 0.77
COL13A1-201ENST00000354547 TFEBP19484 476 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 PIK3R1P27986 724 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 BRCC3P46736 316 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 PCBP1Q15365 356 aaKnown RBP eCLIP19.86■□□□□ 0.77
COL13A1-201ENST00000354547 PCSK7Q16549 785 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 NOMO2Q5JPE7 1267 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 NAPEPLDQ6IQ20 393 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 CEP97Q8IW35 865 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 ZNF483Q8TF39 744 aaPredicted RBP19.86■□□□□ 0.77
COL13A1-201ENST00000354547 NXNL1Q96CM4 212 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 ZNF419Q96HQ0 510 aaPredicted RBP19.86■□□□□ 0.77
COL13A1-201ENST00000354547 XPR1Q9UBH6 696 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 ST3GAL5Q9UNP4 418 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 SBK3P0C264 359 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 TCN1P20061 433 aaPredicted RBP19.86■□□□□ 0.77
COL13A1-201ENST00000354547 LHX1P48742 406 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 RPL14P50914 215 aaKnown RBP19.86■□□□□ 0.77
COL13A1-201ENST00000354547 SCAPQ12770 1279 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 TIGD5Q53EQ6 642 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 TMEM209Q96SK2 561 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 CDRT15Q96T59 188 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 AP5M1Q9H0R1 490 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 NDFIP2Q9NV92 336 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 CNGA3Q16281 694 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 RPS27LQ71UM5 84 aaKnown RBP19.86■□□□□ 0.77
COL13A1-201ENST00000354547 FAM105AQ9NUU6 356 aa19.86■□□□□ 0.77
COL13A1-201ENST00000354547 MAGEB16A2A368 324 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 NEMP2A6NFY4 417 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 STX16-NPEPL1H3BU86 382 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 B3GAT3O94766 335 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 SLC35E2BP0CK96 405 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 ARSAP15289 507 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 CHRNA4P43681 627 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 AAGABQ6PD74 315 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 ATPAF2Q8N5M1 289 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 ZSCAN18Q8TBC5 510 aaPredicted RBP19.85■□□□□ 0.77
COL13A1-201ENST00000354547 ISL2Q96A47 359 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 RCN3Q96D15 328 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 SMARCD1Q96GM5 515 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 INPP5FQ9Y2H2 1132 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 ERI2A8K979 691 aaKnown RBP19.85■□□□□ 0.77
COL13A1-201ENST00000354547 HHLA1C9JL84 531 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 MATN2O00339 956 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 HDAC3O15379 428 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 MTSS1O43312 755 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 CXCR3P49682 368 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 CSE1LP55060 971 aaKnown RBP19.85■□□□□ 0.77
COL13A1-201ENST00000354547 DLG1Q12959 904 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 LIPMQ5VYY2 423 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 BHLHA9Q7RTU4 235 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 DQX1Q8TE96 717 aaKnown RBP19.85■□□□□ 0.77
COL13A1-201ENST00000354547 ELMO2Q96JJ3 720 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 KLHL4Q9C0H6 718 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 SUDS3Q9H7L9 328 aaPredicted RBP19.85■□□□□ 0.77
COL13A1-201ENST00000354547 CYP4F12Q9HCS2 524 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 TMLHEQ9NVH6 421 aa19.85■□□□□ 0.77
COL13A1-201ENST00000354547 ARL5CA6NH57 179 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 TMEM114B3SHH9 223 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 PGFP49763 221 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 CENPLQ8N0S6 344 aaPredicted RBP19.84■□□□□ 0.77
COL13A1-201ENST00000354547 GPR22Q99680 433 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 TBL1YQ9BQ87 522 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 RHOJQ9H4E5 214 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 CHST12Q9NRB3 414 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 PAPOLBQ9NRJ5 636 aaKnown RBP19.84■□□□□ 0.77
COL13A1-201ENST00000354547 MPP6Q9NZW5 540 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 RAP2CQ9Y3L5 183 aa19.84■□□□□ 0.77
COL13A1-201ENST00000354547 AURKAO14965 403 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms