RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 A0A1W2PPE2 198 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 A0A1W2PR64 198 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 A0A1W2PR77 199 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SH3D21A4FU49 640 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 WIPF3A6NGB9 483 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 PEX10O60683 326 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 PAGE4O60829 102 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 TPPPO94811 219 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ELFN1P0C7U0 828 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 CYP4B1P13584 511 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 AZGP1P25311 298 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 TNFRSF8P28908 595 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 BSGP35613 385 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 THPOP40225 353 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 GALCP54803 685 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 CLDN2P57739 230 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 DNASE1L3Q13609 305 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 FGFBP1Q14512 234 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 PCLAFQ15004 111 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ADIPOQQ15848 244 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 LETM2Q2VYF4 491 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 KRTAP19-4Q3LI73 84 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RABL3Q5HYI8 236 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 C6orf163Q5TEZ5 329 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 FBXO42Q6P3S6 717 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SLC46A3Q7Z3Q1 461 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 MDGA2Q7Z553 956 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 D2HGDHQ8N465 521 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 TFAP2BQ92481 460 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SIPA1Q96FS4 1042 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 FEM1CQ96JP0 617 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 FYTTD1Q96QD9 318 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 MNTQ99583 582 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ALOXE3Q9BYJ1 711 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ABHD10Q9NUJ1 306 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 IL1RAPL1Q9NZN1 696 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 NKX1-2Q9UD57 310 aaPredicted RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 CDK13Q14004 1512 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 LOC105378220A0A1B0GUY1 285 aaPredicted RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 OR2A25A4D2G3 310 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 KCNJ18B7U540 433 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 CES2O00748 559 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 FYB1O15117 783 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ADAP00813 363 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 C8AP07357 584 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 NDUFS1P28331 727 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 GKP32189 559 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 PSMB10P40306 273 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RPS7P62081 194 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 KRT83P78385 493 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 LMAN2Q12907 356 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 LASP1Q14847 261 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SF3B3Q15393 1217 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF568Q3ZCX4 644 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ANKRD16Q6P6B7 361 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 KIRREL2Q6UWL6 708 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ISLR2Q6UXK2 745 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 PRPF39Q86UA1 669 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ADGRF2Q8IZF7 708 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM132CQ8N3T6 1108 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SFRP1Q8N474 314 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RASSF8Q8NHQ8 419 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 GTF3C6Q969F1 213 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 DACT3Q96B18 629 aaPredicted RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SAT2Q96F10 170 aaPredicted RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 FAR2Q96K12 515 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF347Q96SE7 839 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 GPR87Q9BY21 358 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SEZ6LQ9BYH1 1024 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 TTC12Q9H892 705 aaPredicted RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 KIF9Q9HAQ2 790 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 FBRSL1Q9HCM7 1045 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM248Q9NWD8 314 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RAPGEFL1Q9UHV5 662 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 QSER1Q2KHR3 1735 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 A0A1W2PS29 197 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 C1orf226A1L170 272 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 MARCH11A6NNE9 402 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 DSCR3O14972 297 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SLC25A17O43808 307 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ZWINTO95229 277 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 KCNK5O95279 499 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 METTL18O95568 372 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 CFIP05156 583 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RB1P06400 928 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ITGAXP20702 1163 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ITGB8P26012 769 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 MRPL12P52815 198 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RAD23AP54725 363 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 PDE1AP54750 535 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 SLC12A2P55011 1212 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RPL7AP62424 266 aaKnown RBP1.73□□□□□ -2.13
BRCA1-202ENST00000354071 RESTQ13127 1097 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 TNFAIP1Q13829 316 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 IL11RAQ14626 422 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 LRIF1Q5T3J3 769 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 ATG14Q6ZNE5 492 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 QSOX2Q6ZRP7 698 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 GDF7Q7Z4P5 450 aa1.73□□□□□ -2.13
BRCA1-202ENST00000354071 GPAT4Q86UL3 456 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms