RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 CDK5RAP2Q96SN8 1893 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 DDX39AO00148 427 aaKnown RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 HDAC3O15379 428 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 PROSCO94903 275 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 C7P10643 843 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 NELFEP18615 380 aaKnown RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 IMPDH1P20839 514 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 SLC7A1P30825 629 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 SDC4P31431 198 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 SESN2P58004 480 aaPredicted RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 ITKQ08881 620 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 MIIPQ5JXC2 388 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 FAM91A1Q658Y4 838 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 GRAMD2AQ8IUY3 354 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 BRSK2Q8IWQ3 736 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 ZBTB8OSQ8IWT0 167 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 DEPDC4Q8N2C3 294 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 ATP6V0D2Q8N8Y2 350 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 TEX19Q8NA77 164 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 TMEM121Q9BTD3 319 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 KANSL2Q9H9L4 492 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 LGR6Q9HBX8 967 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 NGRNQ9NPE2 291 aaKnown RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 UCKL1Q9NWZ5 548 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 PCCAP05165 728 aaPredicted RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 ELK3P41970 407 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 MAPK8P45983 427 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 MERTKQ12866 999 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 ATP6AP1LQ52LC2 224 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 AARS2Q5JTZ9 985 aaKnown RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 TRAPPC3LQ5T215 181 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 PYHIN1Q6K0P9 492 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 PPHLN1Q8NEY8 458 aaKnown RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 TBATAQ96M53 351 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 COQ10BQ9H8M1 238 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 FANCFQ9NPI8 374 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 TBC1D13Q9NVG8 400 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 TMEM161AQ9NX61 479 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 AKAP7Q9P0M2 348 aaPredicted RBP5.1□□□□□ -1.59
SKP1-202ENST00000353411 UBQLN2Q9UHD9 624 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 TMEM59LQ9UK28 342 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 CFL2Q9Y281 166 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 ESPL1Q14674 2120 aa5.1□□□□□ -1.59
SKP1-202ENST00000353411 PPRC1Q5VV67 1664 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 G3V2T6 193 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 RBP1P09455 135 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 AOC1P19801 751 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 FUT11Q495W5 492 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 IL23RQ5VWK5 629 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 GPR180Q86V85 440 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 AMIGO1Q86WK6 493 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 DAGLBQ8NCG7 672 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CPNE1Q99829 537 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 GON7Q9BXV9 100 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MMP27Q9H306 513 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CCDC167Q9P0B6 97 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 SNX9Q9Y5X1 595 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 ATMINO43313 823 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 AIREO43918 545 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 SMCO1Q147U7 214 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 TCEAL1Q15170 157 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 OR6B2Q6IFH4 312 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 TAF8Q7Z7C8 310 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 NLRX1Q86UT6 975 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 FBXO11Q86XK2 927 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 DNAAF5Q86Y56 855 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 KATNAL2Q8IYT4 538 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CBR4Q8N4T8 237 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 RDH11Q8TC12 318 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 SLC5A5Q92911 643 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 GLT1D1Q96MS3 346 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MBOAT7Q96N66 472 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 PHOX2BQ99453 314 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 C1QTNF1Q9BXJ1 281 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 RANBP3Q9H6Z4 567 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 SDK1Q7Z5N4 2213 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 TULP4Q9NRJ4 1543 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 ZNF318Q5VUA4 2279 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MYL12BO14950 172 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 HMGB3O15347 200 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 TIPRLO75663 272 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CFBP00751 764 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 NR4A1P22736 598 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 SDC2P34741 201 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MAGEA2P43356 314 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MAPK9P45984 424 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 HARS2P49590 506 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 ANGEL2Q5VTE6 544 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 VSTM1Q6UX27 236 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 CAND1Q86VP6 1230 aaKnown RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 CPA5Q8WXQ8 436 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 MCEEQ96PE7 176 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 PIGSQ96S52 555 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 KLHL11Q9NVR0 708 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 PAQR5Q9NXK6 330 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 VPS51Q9UID3 782 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 OGDHLQ9ULD0 1010 aa5.09□□□□□ -1.59
SKP1-202ENST00000353411 FRMPD2Q68DX3 1309 aaPredicted RBP5.09□□□□□ -1.59
SKP1-202ENST00000353411 IGSF1Q8N6C5 1336 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms