RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 CENPLQ8N0S6 344 aaPredicted RBP18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 CCNYL1Q8N7R7 359 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 JADE3Q92613 823 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 NXNL1Q96CM4 212 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 PCED1BQ96HM7 432 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 SLC2A6Q9UGQ3 507 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 FIS1Q9Y3D6 152 aa18.39■□□□□ 0.53
PTP4A3-202ENST00000349124 MYOCOSA0A1B0GUC4 107 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 RGSL1A5PLK6 1076 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 DLX3O60479 287 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 KCNE1P15382 129 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 WARSP23381 471 aaKnown RBP18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 NUMBP49757 651 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 DRC3Q9H069 523 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 SIK2Q9H0K1 926 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 NEMP2A6NFY4 417 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 PDHXO00330 501 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 VAPBO95292 243 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 THRAP10827 490 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 RAB27AP51159 221 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 ESRP1Q6NXG1 681 aaKnown RBP18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 SDCCAG8Q86SQ7 713 aaPredicted RBP18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 MFN1Q8IWA4 741 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 KYQ8NBH2 561 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 KCTD13Q8WZ19 329 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 TEKT5Q96M29 485 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 SGIP1Q9BQI5 828 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 WDCPQ9H6R7 721 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 RAP2CQ9Y3L5 183 aa18.38■□□□□ 0.53
PTP4A3-202ENST00000349124 TMEM114B3SHH9 223 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 TIMM44O43615 452 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 SNUPNO95149 360 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 PNPLA4P41247 253 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 ZYG11AQ6WRX3 759 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 PQLC1Q8N2U9 271 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 SNX31Q8N9S9 440 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 NPLOC4Q8TAT6 608 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 MAML3Q96JK9 1138 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 NPAS2Q99743 824 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 FAM192AQ9GZU8 254 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 COPS7BQ9H9Q2 264 aaPredicted RBP18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 UBAP1Q9NZ09 502 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 STK39Q9UEW8 545 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 DTNAQ9Y4J8 743 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 AURKAO14965 403 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 PGK1P00558 417 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 CYLC2Q14093 348 aaPredicted RBP18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 ANO4Q32M45 955 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 LIPMQ5VYY2 423 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 METTL21CQ5VZV1 264 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 RWDD4Q6NW29 188 aaKnown RBP18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 UGT2A3Q6UWM9 527 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 LILRA2Q8N149 483 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 SENP8Q96LD8 212 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 GPR22Q99680 433 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 PAAF1Q9BRP4 392 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 XPR1Q9UBH6 696 aa18.37■□□□□ 0.53
PTP4A3-202ENST00000349124 RRN3P2A6NIE6 340 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 DFFAO00273 331 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 KIF3CO14782 793 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 PRDX6P30041 224 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 GALNT2Q10471 571 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 SNAPC2Q13487 334 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 ZNF423Q2M1K9 1284 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 XKR4Q5GH76 650 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 TSTD2Q5T7W7 516 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 TWF2Q6IBS0 349 aaKnown RBP18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 PDZD4Q76G19 769 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 ST13P4Q8IZP2 240 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 ICA1LQ8NDH6 482 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 IPMKQ8NFU5 416 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 IL22Q9GZX6 179 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 GABRDO14764 452 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 SPATA31D3P0C874 917 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 HNRNPLP14866 589 aaKnown RBP eCLIP18.36■□□□□ 0.535e-14■■■■□ 26.6
PTP4A3-202ENST00000349124 NPY2RP49146 381 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 OGFRL1Q5TC84 451 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 SPATA31D4Q6ZUB0 917 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 PTAR1Q7Z6K3 402 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 TOP6BLQ8N6T0 577 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 HDAC11Q96DB2 347 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 DCUN1D1Q96GG9 259 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 TARM1B6A8C7 271 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 C9IYK1 514 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 CASQ2O14958 399 aaPredicted RBP18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 HDCP19113 662 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 GJA9P57773 515 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 FLOT2Q14254 428 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 PAOXQ6QHF9 649 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 BHLHA9Q7RTU4 235 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 FAM35AQ86V20 835 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 C3orf58Q8NDZ4 430 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 RNF34Q969K3 372 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 TMA16Q96EY4 203 aaKnown RBP18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 TINF2Q9BSI4 451 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 ZNF408Q9H9D4 720 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 CLIC5Q9NZA1 410 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 PSMD13Q9UNM6 376 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 TBC1D30Q9Y2I9 924 aa18.36■□□□□ 0.53
PTP4A3-202ENST00000349124 HOXD8P13378 290 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms