RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 LUC7L3O95232 432 aaKnown RBP19■□□□□ 0.63
PTN-201ENST00000348225 MGAT1P26572 445 aa19■□□□□ 0.63
PTN-201ENST00000348225 HOXD9P28356 352 aaPredicted RBP19■□□□□ 0.63
PTN-201ENST00000348225 GEMIN4P57678 1058 aaKnown RBP19■□□□□ 0.63
PTN-201ENST00000348225 MAGOHP61326 146 aaKnown RBP19■□□□□ 0.63
PTN-201ENST00000348225 ITKQ08881 620 aa19■□□□□ 0.63
PTN-201ENST00000348225 CDH17Q12864 832 aa19■□□□□ 0.63
PTN-201ENST00000348225 MPP3Q13368 585 aa19■□□□□ 0.63
PTN-201ENST00000348225 ZNF235Q14590 738 aa19■□□□□ 0.63
PTN-201ENST00000348225 RFTN1Q14699 578 aaPredicted RBP19■□□□□ 0.63
PTN-201ENST00000348225 SLC5A9Q2M3M2 681 aa19■□□□□ 0.63
PTN-201ENST00000348225 MPPE1Q53F39 396 aa19■□□□□ 0.63
PTN-201ENST00000348225 PRSS36Q5K4E3 855 aa19■□□□□ 0.63
PTN-201ENST00000348225 CXorf57Q6NSI4 855 aaKnown RBP19■□□□□ 0.63
PTN-201ENST00000348225 CCDC117Q8IWD4 279 aaPredicted RBP19■□□□□ 0.63
PTN-201ENST00000348225 BBS7Q8IWZ6 715 aa19■□□□□ 0.63
PTN-201ENST00000348225 MPP5Q8N3R9 675 aa19■□□□□ 0.63
PTN-201ENST00000348225 CARNMT1Q8N4J0 409 aa19■□□□□ 0.63
PTN-201ENST00000348225 TDRD5Q8NAT2 981 aaKnown RBP19■□□□□ 0.63
PTN-201ENST00000348225 GSDMBQ8TAX9 411 aa19■□□□□ 0.63
PTN-201ENST00000348225 SH3RF2Q8TEC5 729 aa19■□□□□ 0.63
PTN-201ENST00000348225 GDPD5Q8WTR4 605 aa19■□□□□ 0.63
PTN-201ENST00000348225 XPO6Q96QU8 1125 aaKnown RBP19■□□□□ 0.63
PTN-201ENST00000348225 CDCA3Q99618 268 aaPredicted RBP19■□□□□ 0.63
PTN-201ENST00000348225 MUC3BQ9H195 1237 aa19■□□□□ 0.63
PTN-201ENST00000348225 VPS45Q9NRW7 570 aa19■□□□□ 0.63
PTN-201ENST00000348225 UBP1Q9NZI7 540 aa19■□□□□ 0.63
PTN-201ENST00000348225 SAMD15Q9P1V8 674 aa19■□□□□ 0.63
PTN-201ENST00000348225 CHD7Q9P2D1 2997 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 TCRBV9S1A1TA0A576 114 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 PGAM1P18669 254 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 NRIP1P48552 1158 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 NPY2RP49146 381 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 GYS2P54840 703 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 CDH18Q13634 790 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 RASA2Q15283 850 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 TNFAIP8L3Q5GJ75 292 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 MPP7Q5T2T1 576 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 RNF219Q5W0B1 726 aaPredicted RBP18.99■□□□□ 0.63
PTN-201ENST00000348225 UNC5AQ6ZN44 842 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 TAOK1Q7L7X3 1001 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.99■□□□□ 0.63
PTN-201ENST00000348225 OR52K2Q8NGK3 314 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 SPATA22Q8NHS9 363 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 DDI1Q8WTU0 396 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 PPP2R3CQ969Q6 453 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 ZNF707Q96C28 371 aaPredicted RBP18.99■□□□□ 0.63
PTN-201ENST00000348225 IMP4Q96G21 291 aaKnown RBP18.99■□□□□ 0.63
PTN-201ENST00000348225 TBL1YQ9BQ87 522 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 FSD1LQ9BXM9 530 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 ACE2Q9BYF1 805 aaPredicted RBP18.99■□□□□ 0.63
PTN-201ENST00000348225 POLR1EQ9GZS1 481 aaKnown RBP18.99■□□□□ 0.63
PTN-201ENST00000348225 TDP1Q9NUW8 608 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 UBA2Q9UBT2 640 aaPredicted RBP18.99■□□□□ 0.63
PTN-201ENST00000348225 ADAM21Q9UKJ8 722 aa18.99■□□□□ 0.63
PTN-201ENST00000348225 CHD9Q3L8U1 2897 aa18.98■□□□□ 0.63
PTN-201ENST00000348225 USP12O75317 370 aa18.98■□□□□ 0.63
PTN-201ENST00000348225 MT-CYBP00156 380 aaPredicted RBP18.98■□□□□ 0.63
PTN-201ENST00000348225 CYBBP04839 570 aa18.98■□□□□ 0.63
PTN-201ENST00000348225 KDM7AQ6ZMT4 941 aa18.98■□□□□ 0.63
PTN-201ENST00000348225 IPMKQ8NFU5 416 aa18.98■□□□□ 0.63
PTN-201ENST00000348225 SMG7Q92540 1137 aaKnown RBP18.98■□□□□ 0.63
PTN-201ENST00000348225 SMG9Q9H0W8 520 aaKnown RBP18.98■□□□□ 0.63
PTN-201ENST00000348225 SFXN1Q9H9B4 322 aa18.98■□□□□ 0.63
PTN-201ENST00000348225 SYBUQ9NX95 663 aa18.98■□□□□ 0.63
PTN-201ENST00000348225 PSMC3IPQ9P2W1 217 aaPredicted RBP18.98■□□□□ 0.63
PTN-201ENST00000348225 SEPT3Q9UH03 358 aa18.98■□□□□ 0.63
PTN-201ENST00000348225 MYO7AQ13402 2215 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 HPDP32754 393 aaPredicted RBP18.97■□□□□ 0.63
PTN-201ENST00000348225 NTHL1P78549 312 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 NR1H3Q13133 447 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 STEAP4Q687X5 459 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 MFN1Q8IWA4 741 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 IL22Q9GZX6 179 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 DZANK1Q9NVP4 752 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 PIH1D1Q9NWS0 290 aaKnown RBP18.97■□□□□ 0.63
PTN-201ENST00000348225 EURLQ9NYK6 297 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 CTNNAL1Q9UBT7 734 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 MRPS23Q9Y3D9 190 aaKnown RBP18.97■□□□□ 0.63
PTN-201ENST00000348225 IKBKGQ9Y6K9 419 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 DOCK6Q96HP0 2047 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 NOTCH4Q99466 2003 aa18.97■□□□□ 0.63
PTN-201ENST00000348225 MAGEB16A2A368 324 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 PMPCBO75439 489 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 PAPLNO95428 1278 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 POLBP06746 335 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 PRKCHP24723 683 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 GCAP28676 217 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 MSH2P43246 934 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 PPP2R2AP63151 447 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 GABPB1Q06547 395 aaPredicted RBP18.96■□□□□ 0.63
PTN-201ENST00000348225 OLIG2Q13516 323 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 TMED2Q15363 201 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 EMC10Q5UCC4 262 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 LEKR1Q6ZMV7 388 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 USP13Q92995 863 aaPredicted RBP18.96■□□□□ 0.63
PTN-201ENST00000348225 PAFAH2Q99487 392 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 APOL2Q9BQE5 337 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 FICDQ9BVA6 458 aa18.96■□□□□ 0.63
PTN-201ENST00000348225 CINPQ9BW66 212 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms