RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 LDLRP01130 860 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 NDUFV1P49821 464 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 MPP1Q00013 466 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 IRF9Q00978 393 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 CELF3Q5SZQ8 465 aaKnown RBP10.62□□□□□ -0.71
SMG7-201ENST00000347615 MAP1SQ66K74 1059 aaPredicted RBP10.62□□□□□ -0.71
SMG7-201ENST00000347615 TIGD7Q6NT04 549 aaPredicted RBP10.62□□□□□ -0.71
SMG7-201ENST00000347615 ARPINQ7Z6K5 226 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 PLD5Q8N7P1 536 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 SPPL2AQ8TCT8 520 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 CCDC126Q96EE4 140 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 S100A14Q9HCY8 104 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 SH3BP1Q9Y3L3 701 aa10.62□□□□□ -0.71
SMG7-201ENST00000347615 MYH10P35580 1976 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 TK2O00142 265 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 NTRK1P04629 796 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CCNB1P14635 433 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 IL1R2P27930 398 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 TBX4P57082 545 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 RHOAP61586 193 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 MSS51Q4VC12 460 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 SPPL2CQ8IUH8 684 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 LGI2Q8N0V4 545 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 DHRSXQ8N5I4 330 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 B3GALT6Q96L58 329 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 DPY30Q9C005 99 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CDH19Q9H159 772 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 CIDEBQ9UHD4 219 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 SLC12A4Q9UP95 1085 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 LOC100506127A0A0U1RQW1 187 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 MAFO75444 373 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 ARIH2O95376 493 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 F9P00740 461 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CDH2P19022 906 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 ABL2P42684 1182 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 KLF1Q13351 362 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 FAM228AQ86W67 206 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CDYL2Q8N8U2 506 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CLHC1Q8NHS4 586 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 ITFG1Q8TB96 612 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 WNT8BQ93098 351 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 ZNF570Q96NI8 536 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 PARK7Q99497 189 aaKnown RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 GORASP1Q9BQQ3 440 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 RRN3Q9NYV6 651 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 SLC27A5Q9Y2P5 690 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 PCDHB7Q9Y5E2 793 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 FMN2Q9NZ56 1722 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 NFAT5O94916 1531 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 TTC24A2A3L6 582 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 RGSL1A5PLK6 1076 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 RAMP2O60895 175 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 LRATO95237 230 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 VNN1O95497 513 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 RHOCP08134 193 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CSH1P0DML2 217 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CSH2P0DML3 217 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 ARF4P18085 180 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 GABRB2P47870 512 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 SLC7A2P52569 658 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 ATN1P54259 1190 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 WDR60Q8WVS4 1066 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 LENG1Q96BZ8 264 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 FAR2Q96K12 515 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 ASB7Q9H672 318 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 POLR1BQ9H9Y6 1135 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 ZNHIT2Q9UHR6 403 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CLCA2Q9UQC9 943 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 DGKBQ9Y6T7 804 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 SLCO1B7G3V0H7 640 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 HCRTO43612 131 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 SKIV2L2P42285 1042 aaKnown RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 PGGT1BP53609 377 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 CHADLQ6NUI6 762 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 OR6K2Q8NGY2 324 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 RAET1EQ8TD07 263 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 NXNL1Q96CM4 212 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 MMADHCQ9H3L0 296 aaPredicted RBP10.61□□□□□ -0.71
SMG7-201ENST00000347615 PARVBQ9HBI1 364 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 TMEM216Q9P0N5 145 aa10.61□□□□□ -0.71
SMG7-201ENST00000347615 SRRM3A6NNA2 597 aaPredicted RBP10.6□□□□□ -0.71
SMG7-201ENST00000347615 MDM4O15151 490 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 LYNP07948 512 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 ALOX12P18054 663 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 CCNFP41002 786 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 ALDH9A1P49189 494 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 NEK3P51956 506 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 STARD3Q14849 445 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 PPM1LQ5SGD2 360 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 CATSPERGQ6ZRH7 1159 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 RALGPS2Q86X27 583 aaPredicted RBP10.6□□□□□ -0.71
SMG7-201ENST00000347615 NAT16Q8N8M0 369 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 FAM47BQ8NA70 645 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 LENG8Q96PV6 779 aaPredicted RBP10.6□□□□□ -0.71
SMG7-201ENST00000347615 RICTORQ6R327 1708 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 NALCNQ8IZF0 1738 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 HGFP14210 728 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 NOMO1Q15155 1222 aa10.6□□□□□ -0.71
SMG7-201ENST00000347615 TAF2Q6P1X5 1199 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms