RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 LRRC40Q9H9A6 602 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 TMEM51Q9NW97 253 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 ACTL7BQ9Y614 415 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 IRAK3Q9Y616 596 aa13.81□□□□□ -0.2
CDC42-202ENST00000344548 DENND4CQ5VZ89 1909 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 UNC80Q8N2C7 3258 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 GOLGA8TH3BQL2 631 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 ADH1AP07327 375 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 INHBAP08476 426 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 NMBRP28336 390 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 CLCN4P51793 760 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 GNA12Q03113 381 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 TMEM135Q86UB9 458 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 SLC26A11Q86WA9 606 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 LRRC49Q8IUZ0 686 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 TEX26Q8N6G2 289 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 RIN3Q8TB24 985 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 ARRDC2Q8TBH0 407 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 WFDC5Q8TCV5 224 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 CENPTQ96BT3 561 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 TCEAL4Q96EI5 215 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 ZNF317Q96PQ6 595 aaPredicted RBP13.8□□□□□ -0.2
CDC42-202ENST00000344548 CCT8L2Q96SF2 557 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 GMNCA6NCL1 334 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 ERI2A8K979 691 aaKnown RBP13.8□□□□□ -0.2
CDC42-202ENST00000344548 PRAMEF11O60813 436 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 LRG1P02750 347 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 CD86P42081 329 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 MAPKAPK2P49137 400 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 ITKQ08881 620 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 PRPSAP1Q14558 356 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 POU6F1Q14863 301 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 ZSCAN26Q16670 478 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 PARP15Q460N3 678 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 CXorf57Q6NSI4 855 aaKnown RBP13.8□□□□□ -0.2
CDC42-202ENST00000344548 KDELC1Q6UW63 502 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 RANBP10Q6VN20 620 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 AZIN2Q96A70 460 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 ZNF669Q96BR6 464 aaPredicted RBP13.8□□□□□ -0.2
CDC42-202ENST00000344548 IMP4Q96G21 291 aaKnown RBP13.8□□□□□ -0.2
CDC42-202ENST00000344548 AGAP2Q99490 1192 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 TBL1YQ9BQ87 522 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 SPON2Q9BUD6 331 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 SLC46A2Q9BY10 475 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 BFARQ9NZS9 450 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 UXTQ9UBK9 157 aaPredicted RBP13.8□□□□□ -0.2
CDC42-202ENST00000344548 XIRP2A4UGR9 3374 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 TRANK1O15050 2925 aa13.8□□□□□ -0.2
CDC42-202ENST00000344548 TRIM49D1C9J1S8 452 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 PER2O15055 1255 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 TOP3BO95985 862 aaKnown RBP13.79□□□□□ -0.2
CDC42-202ENST00000344548 MYL4P12829 197 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 EPCAMP16422 314 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 GMPRP36959 345 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 RGRP47804 291 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 PPP3CCP48454 512 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 RENBPP51606 427 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 CDH4P55283 916 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 WNT3AP56704 352 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 YBEYP58557 167 aaPredicted RBP13.79□□□□□ -0.2
CDC42-202ENST00000344548 IL10RBQ08334 325 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 ANKRD20A4Q4UJ75 823 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 Q6ZNB5 142 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 CDHR3Q6ZTQ4 885 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 ITIH5Q86UX2 942 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 MICAL1Q8TDZ2 1067 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 PPCSQ9HAB8 311 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 TLR9Q9NR96 1032 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 STOML2Q9UJZ1 356 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 CLEC4EQ9ULY5 219 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 CCL26Q9Y258 94 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 AAR2Q9Y312 384 aaKnown RBP13.79□□□□□ -0.2
CDC42-202ENST00000344548 PRRC2BQ5JSZ5 2229 aaKnown RBP13.79□□□□□ -0.2
CDC42-202ENST00000344548 CARNS1A5YM72 827 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 FAM47DPA6NHR8 397 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 GFRA2O00451 464 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 GLUD1P00367 558 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 GSTA2P09210 222 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 ABCG1P45844 678 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 CDH17Q12864 832 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 LBRQ14739 615 aaKnown RBP13.79□□□□□ -0.2
CDC42-202ENST00000344548 ANO4Q32M45 955 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 MROH9Q5TGP6 573 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 IL31Q6EBC2 164 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 NAPEPLDQ6IQ20 393 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 SLC25A41Q8N5S1 370 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 PNPLA1Q8N8W4 532 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 BANPQ8N9N5 519 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 PHOSPHO2Q8TCD6 241 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 TTC17Q96AE7 1141 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 CERS2Q96G23 380 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 SMC6Q96SB8 1091 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 SLC25A51Q9H1U9 297 aa13.79□□□□□ -0.2
CDC42-202ENST00000344548 MOSPD3O75425 235 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 RFPL1O75677 317 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 ZNF189O75820 626 aaPredicted RBP13.78□□□□□ -0.2
CDC42-202ENST00000344548 ANXA9O76027 345 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 CD160O95971 181 aa13.78□□□□□ -0.2
CDC42-202ENST00000344548 CKMP06732 381 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms