RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 MYO9BQ13459 2157 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 CD3EAPO15446 510 aaKnown RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 ERAL1O75616 437 aaKnown RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 RTN3O95197 1032 aaPredicted RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 LRATO95237 230 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 IL12RB1P42701 662 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 FCHO2Q0JRZ9 810 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 TAS1R2Q8TE23 839 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 ZNF483Q8TF39 744 aaPredicted RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 RNF145Q96MT1 663 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 OSGEPQ9NPF4 335 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 IMP3Q9NV31 184 aaKnown RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 DIP2AQ14689 1571 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 THRAP10827 490 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 SLC1A6P48664 564 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 HK2P52789 917 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 BNC1Q01954 994 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 PPIL2Q13356 520 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 GALNT3Q14435 633 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 USP41Q3LFD5 358 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 ZCCHC23Q6ZST2 131 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 C12orf50Q8NA57 414 aaPredicted RBP12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 OR14C36Q8NHC7 312 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 STK39Q9UEW8 545 aa12.4□□□□□ -0.42
TRIOBP-202ENST00000344404 GAKO14976 1311 aa12.4□□□□□ -0.43
TRIOBP-202ENST00000344404 TOP3BO95985 862 aaKnown RBP12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 BCAP31P51572 246 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 PTPN11Q06124 597 aaPredicted RBP12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 PDK2Q15119 407 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 WDR60Q8WVS4 1066 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 MCRS1Q96EZ8 462 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 TCF25Q9BQ70 676 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 ATG10Q9H0Y0 220 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 ASB8Q9H765 288 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 CATSPERZQ9NTU4 200 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 ADPRHL2Q9NX46 363 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 WWP2O00308 870 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 SPAG6O75602 509 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 SBK1Q52WX2 424 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 NOMO2Q5JPE7 1267 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 OR52L1Q8NGH7 329 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 MARCH2Q9P0N8 246 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 EIF2S3P41091 472 aaKnown RBP12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 PDX1P52945 283 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 COL9A2Q14055 689 aaPredicted RBP12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 ZNF605Q86T29 641 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 SGMS1Q86VZ5 419 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 SLC9A6Q92581 669 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 OGDHLQ9ULD0 1010 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 INVSQ9Y283 1065 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 ACOT9Q9Y305 439 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 FBXO21O94952 628 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 LYNP07948 512 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 CPA3P15088 417 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 SERPINA4P29622 427 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 MRPS6P82932 125 aaKnown RBP12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 MC1RQ01726 317 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 KCNA10Q16322 511 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 CYP2A13Q16696 494 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 LRRC6Q86X45 466 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 REXO1L1PQ8IX06 675 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 HDDC3Q8N4P3 179 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 REPS1Q96D71 796 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 CDH9Q9ULB4 789 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 SSNA1O43805 119 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 LGALS3BPQ08380 585 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 MADCAM1Q13477 382 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 DLK2Q6UY11 383 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 ARMC8Q8IUR7 673 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 MAML3Q96JK9 1138 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 MMP13P45452 471 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 ITGA9Q13797 1035 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 CENPIQ92674 756 aaPredicted RBP12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 RMND5BQ96G75 393 aaPredicted RBP12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 DGCR6LQ9BY27 220 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 DSN1Q9H410 356 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 MCCC2Q9HCC0 563 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 OPTCQ9UBM4 332 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 SF3B1O75533 1304 aaKnown RBP eCLIP12.39□□□□□ -0.434e-7■■■■■ 86.2
TRIOBP-202ENST00000344404 MROH7Q68CQ1 1323 aa12.39□□□□□ -0.43
TRIOBP-202ENST00000344404 LGALS2P05162 132 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 PACS2Q86VP3 889 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 FBXO30Q8TB52 745 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 UNC13BO14795 1591 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 PTPRJQ12913 1337 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 ATXN2Q99700 1313 aaKnown RBP12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 A8MU76 341 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 ATP5C1P36542 298 aaKnown RBP12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 PFKFB4Q16877 469 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 ZBTB49Q6ZSB9 765 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 DEFB106AQ8N104 65 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 SPATA6LQ8N4H0 392 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 PJA1Q8NG27 643 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 ZBTB10Q96DT7 871 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 PAFAH2Q99487 392 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 NDNQ99608 321 aa12.38□□□□□ -0.43
TRIOBP-202ENST00000344404 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms