RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 RPH3AQ9Y2J0 694 aaPredicted RBP17.84■□□□□ 0.45
SMAD4-201ENST00000342988 MROH7-TTC4A0A0A0MT08 1334 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 NAB1Q13506 487 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF227Q86WZ6 799 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 CD101Q93033 1021 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 SLC25A23Q9BV35 468 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 AASSQ9UDR5 926 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 L7N2F9 121 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 POLD2P49005 469 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 BCAT1P54687 386 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 VAMP2P63027 116 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 CHST15Q7LFX5 561 aaPredicted RBP17.84■□□□□ 0.45
SMAD4-201ENST00000342988 JAZF1Q86VZ6 243 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 OR52K2Q8NGK3 314 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 CCDC107Q8WV48 283 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 MTG1Q9BT17 334 aaPredicted RBP17.84■□□□□ 0.45
SMAD4-201ENST00000342988 CDH19Q9H159 772 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 BTBD19C9JJ37 291 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 UPP2O95045 317 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 TYMPP19971 482 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 TRIM40Q6P9F5 258 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 RTL4Q6ZR62 310 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 OTUB2Q96DC9 234 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 DBTP11182 482 aaKnown RBP17.84■□□□□ 0.45
SMAD4-201ENST00000342988 XKR3Q5GH77 459 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 ZCCHC12Q6PEW1 402 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 SNX20Q7Z614 316 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 GPSM1Q86YR5 675 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 USP38Q8NB14 1042 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 KAT5Q92993 513 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 PHF12Q96QT6 1004 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 TSPAN18Q96SJ8 248 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 NIF3L1Q9GZT8 377 aa17.84■□□□□ 0.45
SMAD4-201ENST00000342988 M0QYT0 321 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 ANXA5P08758 320 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 DYNLL1P63167 89 aaKnown RBP17.83■□□□□ 0.45
SMAD4-201ENST00000342988 MOV10Q9HCE1 1003 aaKnown RBP17.83■□□□□ 0.45
SMAD4-201ENST00000342988 LAMC3Q9Y6N6 1575 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 CYP1A1P04798 512 aaPredicted RBP17.83■□□□□ 0.45
SMAD4-201ENST00000342988 ZNF3P17036 446 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 ERCC2P18074 760 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 RPA1P27694 616 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 GSTT1P30711 240 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 DRG2P55039 364 aaKnown RBP17.83■□□□□ 0.45
SMAD4-201ENST00000342988 TUBA1BP68363 451 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 FAAH2Q6GMR7 532 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 TUBA1AQ71U36 451 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 RELL1Q8IUW5 271 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 TTLL6Q8N841 843 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 TSEN15Q8WW01 171 aaKnown RBP17.83■□□□□ 0.45
SMAD4-201ENST00000342988 MID1IP1Q9NPA3 183 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 SOHLH2Q9NX45 425 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 IFNA16P05015 189 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 UCHL3P15374 230 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 FAM189A2Q15884 450 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 RABL6Q3YEC7 729 aaPredicted RBP17.83■□□□□ 0.45
SMAD4-201ENST00000342988 ZIM3Q96PE6 472 aa17.83■□□□□ 0.45
SMAD4-201ENST00000342988 EPORP19235 508 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 ACAP2Q15057 778 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 RNF19BQ6ZMZ0 732 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 ATL1Q8WXF7 558 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 C2CD2LO14523 706 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 USP45Q70EL2 814 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 ADSSL1Q8N142 457 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 SAR1AQ9NR31 198 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 CCDC167Q9P0B6 97 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 PRELID1Q9Y255 219 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 MBL2P11226 248 aaPredicted RBP17.83■□□□□ 0.44
SMAD4-201ENST00000342988 PSMA1P25786 263 aaKnown RBP17.83■□□□□ 0.44
SMAD4-201ENST00000342988 TAF6P49848 677 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 BPIFB6Q8NFQ5 453 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 FBXO44Q9H4M3 255 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 CUEDC1Q9NWM3 386 aaPredicted RBP17.83■□□□□ 0.44
SMAD4-201ENST00000342988 CYP21A2P08686 494 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 COMTP21964 271 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 SLC6A2P23975 617 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 ACOT2P49753 483 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 MAZP56270 477 aaKnown RBP17.83■□□□□ 0.44
SMAD4-201ENST00000342988 SLC10A7Q0GE19 358 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 LSM12Q3MHD2 195 aaKnown RBP17.83■□□□□ 0.44
SMAD4-201ENST00000342988 TMEM17Q86X19 198 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 FNDC11Q9BVV2 318 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 ENY2Q9NPA8 101 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 RBM12Q9NTZ6 932 aaKnown RBP17.83■□□□□ 0.44
SMAD4-201ENST00000342988 HPF1Q9NWY4 346 aa17.83■□□□□ 0.44
SMAD4-201ENST00000342988 LRRIQ1Q96JM4 1722 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 CBWD1Q9BRT8 395 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
SMAD4-201ENST00000342988 MOCS1Q9NZB8 636 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 OR1I1O60431 355 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 HOXB8P17481 243 aaPredicted RBP17.82■□□□□ 0.44
SMAD4-201ENST00000342988 KYAT3Q6YP21 454 aaKnown RBP17.82■□□□□ 0.44
SMAD4-201ENST00000342988 SYT12Q8IV01 421 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 MREGQ8N565 214 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 NELL1Q92832 810 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 CRKLP46109 303 aaKnown RBP17.82■□□□□ 0.44
SMAD4-201ENST00000342988 CNSTQ6PJW8 725 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 AFTPHQ6ULP2 937 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 FAM81AQ8TBF8 368 aa17.82■□□□□ 0.44
SMAD4-201ENST00000342988 ABHD14A-ACY1A0A1B0GW23 586 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms