RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 USP53Q70EK8 1073 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 ERN2Q76MJ5 926 aaKnown RBP17.29■□□□□ 0.36
TRA2B-202ENST00000342294 WDR48Q8TAF3 677 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 SGF29Q96ES7 293 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 LIN37Q96GY3 246 aaPredicted RBP17.29■□□□□ 0.36
TRA2B-202ENST00000342294 TRIM62Q9BVG3 475 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 SLC17A9Q9BYT1 436 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 PCDHB4Q9Y5E5 795 aa17.29■□□□□ 0.36
TRA2B-202ENST00000342294 RP1P56715 2156 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 NTN3O00634 580 aaPredicted RBP17.28■□□□□ 0.36
TRA2B-202ENST00000342294 SPINT1O43278 529 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 SLC5A2P31639 672 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 SRSF6Q13247 344 aaKnown RBP17.28■□□□□ 0.36
TRA2B-202ENST00000342294 TPRG1LQ5T0D9 272 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 SLC35F3Q8IY50 421 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 KAT5Q92993 513 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 PSMB7Q99436 277 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 KLF6Q99612 283 aaPredicted RBP17.28■□□□□ 0.36
TRA2B-202ENST00000342294 SLC4A5Q9BY07 1137 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 POPDC2Q9HBU9 364 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 ANKMY1Q9P2S6 941 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 SLC12A6Q9UHW9 1150 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 VPS28Q9UK41 221 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 TBC1D30Q9Y2I9 924 aa17.28■□□□□ 0.36
TRA2B-202ENST00000342294 FARP1Q9Y4F1 1045 aaPredicted RBP17.28■□□□□ 0.36
TRA2B-202ENST00000342294 K7ERQ8 282 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 PLD2O14939 933 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 MUSKO15146 869 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 SLC16A3O15427 465 aaKnown RBP17.27■□□□□ 0.36
TRA2B-202ENST00000342294 PAK4O96013 591 aaPredicted RBP17.27■□□□□ 0.36
TRA2B-202ENST00000342294 F13A1P00488 732 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 PRNPP04156 253 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 FAM87AP0C7U9 286 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 ZSCAN22P10073 491 aaPredicted RBP17.27■□□□□ 0.36
TRA2B-202ENST00000342294 SFTPCP11686 197 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 JUNDP17535 347 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 ACADSBP45954 432 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 RABIFP47224 123 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 YWHAZP63104 245 aaKnown RBP17.27■□□□□ 0.36
TRA2B-202ENST00000342294 EIF2B5Q13144 721 aaKnown RBP17.27■□□□□ 0.36
TRA2B-202ENST00000342294 AUHQ13825 339 aaKnown RBP17.27■□□□□ 0.36
TRA2B-202ENST00000342294 TGIF1Q15583 401 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 CHST14Q8NCH0 376 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 LMX1AQ8TE12 382 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 STK32AQ8WU08 396 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 NAT6Q93015 286 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 RNF34Q969K3 372 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 SLC35C1Q96A29 364 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 CCDC114Q96M63 670 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 RPRD1AQ96P16 312 aaPredicted RBP17.27■□□□□ 0.36
TRA2B-202ENST00000342294 IL12RB2Q99665 862 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 ARHGAP9Q9BRR9 750 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 DYRK4Q9NR20 520 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 CFAP45Q9UL16 551 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 FLNCQ14315 2725 aa17.27■□□□□ 0.36
TRA2B-202ENST00000342294 K7ELQ4 463 aaPredicted RBP17.26■□□□□ 0.35
TRA2B-202ENST00000342294 SMAD6O43541 496 aaKnown RBP17.26■□□□□ 0.35
TRA2B-202ENST00000342294 SNAP91O60641 907 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 GCATO75600 419 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 SLC2A3P11169 496 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 RPIAP49247 311 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 INHBCP55103 352 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 RPS21P63220 83 aaKnown RBP17.26■□□□□ 0.35
TRA2B-202ENST00000342294 SPIDRQ14159 915 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 C5orf22Q49AR2 442 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 ARSIQ5FYB1 569 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 KIAA1161Q6NSJ0 714 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 C14orf80Q86SX3 495 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 TMEM110Q86TL2 294 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 FEM1CQ96JP0 617 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 LENG8Q96PV6 779 aaPredicted RBP17.26■□□□□ 0.35
TRA2B-202ENST00000342294 CCDC3Q9BQI4 270 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 THAP9Q9H5L6 903 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 ST7Q9NRC1 585 aa17.26■□□□□ 0.35
TRA2B-202ENST00000342294 FAM237AA0A1B0GTK4 181 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 CLDN11O75508 207 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 CCR1P32246 355 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 UGT1A5P35504 534 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 PFN3P60673 137 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 DNM1Q05193 864 aaKnown RBP17.25■□□□□ 0.35
TRA2B-202ENST00000342294 EIF3IQ13347 325 aaKnown RBP17.25■□□□□ 0.35
TRA2B-202ENST00000342294 MAPK8IP2Q13387 824 aaPredicted RBP17.25■□□□□ 0.35
TRA2B-202ENST00000342294 PDE1CQ14123 709 aaPredicted RBP17.25■□□□□ 0.35
TRA2B-202ENST00000342294 DENND1BQ6P3S1 775 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 B3GNT8Q7Z7M8 397 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 SMYD4Q8IYR2 804 aaPredicted RBP17.25■□□□□ 0.35
TRA2B-202ENST00000342294 ATP11CQ8NB49 1132 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 BTN2A2Q8WVV5 523 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 TBATAQ96M53 351 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 NT5C1BQ96P26 610 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 C1QTNF2Q9BXJ5 285 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 SRRTQ9BXP5 876 aaKnown RBP17.25■□□□□ 0.35
TRA2B-202ENST00000342294 TCEAL2Q9H3H9 227 aaPredicted RBP17.25■□□□□ 0.35
TRA2B-202ENST00000342294 SPASTQ9UBP0 616 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 IL36AQ9UHA7 158 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 IPO11Q9UI26 975 aaKnown RBP17.25■□□□□ 0.35
TRA2B-202ENST00000342294 VPS51Q9UID3 782 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 VANGL2Q9ULK5 521 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 FADS3Q9Y5Q0 445 aa17.25■□□□□ 0.35
TRA2B-202ENST00000342294 WASF2Q9Y6W5 498 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms