RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 SMAD6O43541 496 aaKnown RBP19.57■□□□□ 0.72
SYNE4-202ENST00000340477 GNSP15586 552 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 ERCC2P18074 760 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 SERPINB6P35237 376 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 ARHGAP8P85298 464 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 MESDQ14696 234 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 CCDC6Q16204 474 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 PLA2G2CQ5R387 149 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 MAP7D3Q8IWC1 876 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 RYBPQ8N488 228 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-202ENST00000340477 HDDC3Q8N4P3 179 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 PIP4K2CQ8TBX8 421 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 SNX19Q92543 992 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 ZNF419Q96HQ0 510 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-202ENST00000340477 PPP1R16AQ96I34 528 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 TNKS2Q9H2K2 1166 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 PARD6AQ9NPB6 346 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 OSGEPQ9NPF4 335 aa19.57■□□□□ 0.72
SYNE4-202ENST00000340477 CWC15Q9P013 229 aaKnown RBP19.57■□□□□ 0.72
SYNE4-202ENST00000340477 RCOR3Q9P2K3 495 aaPredicted RBP19.57■□□□□ 0.72
SYNE4-202ENST00000340477 FCF1Q9Y324 198 aaKnown RBP19.57■□□□□ 0.72
SYNE4-202ENST00000340477 ATXN2Q99700 1313 aaKnown RBP19.56■□□□□ 0.72
SYNE4-202ENST00000340477 TCF4P15884 667 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 SDHBP21912 280 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 ITPKAP23677 461 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 CHRNA3P32297 505 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 CDH6P55285 790 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 SNRPD1P62314 119 aaKnown RBP19.56■□□□□ 0.72
SYNE4-202ENST00000340477 SERINC3Q13530 473 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 ODF2Q5BJF6 829 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 TMCO3Q6UWJ1 677 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 CEP76Q8TAP6 659 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 ISG20Q96AZ6 181 aaKnown RBP19.56■□□□□ 0.72
SYNE4-202ENST00000340477 CELF6Q96J87 481 aaKnown RBP19.56■□□□□ 0.72
SYNE4-202ENST00000340477 NUSAP1Q9BXS6 441 aaKnown RBP19.56■□□□□ 0.72
SYNE4-202ENST00000340477 IL36AQ9UHA7 158 aa19.56■□□□□ 0.72
SYNE4-202ENST00000340477 FRYLO94915 3013 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 DFFAO00273 331 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 KPNA3O00505 521 aaPredicted RBP19.55■□□□□ 0.72
SYNE4-202ENST00000340477 SLC7A4O43246 635 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 MTA2O94776 668 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 ACSL1P33121 698 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 NOP2P46087 812 aaKnown RBP19.55■□□□□ 0.72
SYNE4-202ENST00000340477 DPYSQ14117 519 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 CARD16Q5EG05 197 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 DCAF12L1Q5VU92 463 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 POLNQ7Z5Q5 900 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 SLC41A1Q8IVJ1 513 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 SPC24Q8NBT2 197 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 KCTD6Q8NC69 237 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 TMIEQ8NEW7 156 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 OR2A12Q8NGT7 310 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 GRIN3AQ8TCU5 1115 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 CSPG4P5Q96PW8 444 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 NOL6Q9H6R4 1146 aaKnown RBP19.55■□□□□ 0.72
SYNE4-202ENST00000340477 LRRC19Q9H756 370 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 SP110Q9HB58 689 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 PCDH18Q9HCL0 1135 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 UBA2Q9UBT2 640 aaPredicted RBP19.55■□□□□ 0.72
SYNE4-202ENST00000340477 PILRBQ9UKJ0 227 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 PPM1HQ9ULR3 514 aa19.55■□□□□ 0.72
SYNE4-202ENST00000340477 FAM47DPA6NHR8 397 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 LCA5LO95447 670 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 IGSF6O95976 241 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 GSRP00390 522 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 CFIP05156 583 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 RHOAP61586 193 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 RAD51Q06609 339 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 PDK2Q15119 407 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 SF3A2Q15428 464 aaKnown RBP19.54■□□□□ 0.72
SYNE4-202ENST00000340477 DUOXA1Q1HG43 343 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 INO80DQ53TQ3 878 aaPredicted RBP19.54■□□□□ 0.72
SYNE4-202ENST00000340477 TRIM61Q5EBN2 209 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 TXNRD3NBQ6F5E7 133 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 LEKR1Q6ZMV7 388 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 DPY19L3Q6ZPD9 716 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 TXLNBQ8N3L3 684 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 AADATQ8N5Z0 425 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 OR14C36Q8NHC7 312 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 GDAP1L1Q96MZ0 367 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 BAG1Q99933 345 aaPredicted RBP19.54■□□□□ 0.72
SYNE4-202ENST00000340477 HEPHQ9BQS7 1158 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 CALN1Q9BXU9 219 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 TM6SF2Q9BZW4 377 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 MIR1-1HGQ9H1L0 117 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 NEUROG2Q9H2A3 272 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 ZDHHC6Q9H6R6 413 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 EVLQ9UI08 416 aaPredicted RBP19.54■□□□□ 0.72
SYNE4-202ENST00000340477 CDV3Q9UKY7 258 aaKnown RBP19.54■□□□□ 0.72
SYNE4-202ENST00000340477 TPX2Q9ULW0 747 aaKnown RBP19.54■□□□□ 0.72
SYNE4-202ENST00000340477 PCDHA13Q9Y5I0 950 aa19.54■□□□□ 0.72
SYNE4-202ENST00000340477 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.54■□□□□ 0.72
SYNE4-202ENST00000340477 SOWAHDA6NJG2 315 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 METTL12A8MUP2 240 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 TMCC1O94876 653 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 FSBPO95073 299 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 NDUFA10O95299 355 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 TGM1P22735 817 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 SLC1A1P43005 524 aa19.53■□□□□ 0.72
SYNE4-202ENST00000340477 PAPOLAP51003 745 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms