RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PIP4K2CQ8TBX8 421 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 CASKIN2Q8WXE0 1202 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 PPP1R16AQ96I34 528 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 RAB6CQ9H0N0 254 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 TM9SF3Q9HD45 589 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 DYRK4Q9NR20 520 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 FZD10Q9ULW2 581 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 CAPN11Q9UMQ6 739 aa13.62□□□□□ -0.23
SIRPB3P-201ENST00000340424 TMEM191CA6NGB0 347 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 WASH4PA8MWX3 477 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 FAM72CH0Y354 149 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 DDX3XO00571 662 aaKnown RBP eCLIP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 LATO43561 262 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 DFNA5O60443 496 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 RNF8O76064 485 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 SERPING1P05155 500 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 PSMA2P25787 234 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 EPHB2P29323 1055 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 CHRNA3P32297 505 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 NUMBP49757 651 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 YBEYP58557 167 aaPredicted RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 ARF5P84085 180 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 ACAP1Q15027 740 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 PARP15Q460N3 678 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 TDRD12Q587J7 1177 aaKnown RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 SLC45A4Q5BKX6 768 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 FAM72AQ5TYM5 149 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 AGBL4Q5VU57 503 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 E4F1Q66K89 784 aaPredicted RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 FAM72DQ6L9T8 149 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 NEK5Q6P3R8 708 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 LINGO4Q6UY18 593 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 ADAT2Q7Z6V5 191 aaKnown RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 TRIM69Q86WT6 500 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 FAM72BQ86X60 149 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 PSTKQ8IV42 348 aaKnown RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 RTL3Q8N8U3 475 aaKnown RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 ARHGEF2Q92974 986 aaKnown RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZNF653Q96CK0 615 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 LRIG1Q96JA1 1093 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 ORAI3Q9BRQ5 295 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 ISCUQ9H1K1 167 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 PREBQ9HCU5 417 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 FSCN3Q9NQT6 498 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 CNOT8Q9UFF9 292 aaKnown RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 IL36AQ9UHA7 158 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 DNAI1Q9UI46 699 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 LUC7L2Q9Y383 392 aaKnown RBP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 PCDHGB2Q9Y5G2 931 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 CHD5Q8TDI0 1954 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 NUMA1Q14980 2115 aa13.61□□□□□ -0.23
SIRPB3P-201ENST00000340424 ADAMTS9Q9P2N4 1935 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 SPTBN2O15020 2390 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3DA0A087WVF3 549 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3IA0A087WXS9 549 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3EA0A087X179 549 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3KA0A087X1G2 549 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3FA6NER0 549 aaPredicted RBP13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3LB9A6J9 549 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 K7ERQ8 282 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 VILLO15195 856 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 CBFA2T2O43439 604 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 SMAD6O43541 496 aaKnown RBP13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3HP0C7X1 549 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 GLDCP23378 1020 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 CSNK1EP49674 416 aaKnown RBP13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 SHC2P98077 582 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 OGDHQ02218 1023 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 CNTN1Q12860 1018 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TRIM14Q14142 442 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 HLA-BQ31612 363 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 N4BP2L1Q5TBK1 243 aaPredicted RBP13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 HGSNATQ68CP4 663 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3GQ6DHY5 549 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3CQ6IPX1 549 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 PRPF39Q86UA1 669 aaKnown RBP13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZSCAN30Q86W11 494 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 TBC1D3Q8IZP1 549 aaPredicted RBP13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 HDAC8Q9BY41 377 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 GAREM1Q9H706 876 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 IFNKQ9P0W0 207 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 SARDHQ9UL12 918 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 DMTF1Q9Y222 760 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 ANKRD6Q9Y2G4 727 aa13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 ASCC3Q8N3C0 2202 aaKnown RBP13.6□□□□□ -0.23
SIRPB3P-201ENST00000340424 A0A1B0GVT2 93 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 KPNA3O00505 521 aaPredicted RBP13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 KDELR3O43731 214 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 CREB3O43889 395 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 BNIP3LO60238 219 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 PRPSAP2O60256 369 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 RNGTTO60942 597 aaKnown RBP13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 ZNF821O75541 412 aaPredicted RBP13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 GSRP00390 522 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 CTSLP07711 333 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 SKILP12757 684 aa13.59□□□□□ -0.23
SIRPB3P-201ENST00000340424 CD59P13987 128 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms