RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 NOL6Q9H6R4 1146 aaKnown RBP14.91□□□□□ -0.02
ERCC1-203ENST00000340192 CATSPERBQ9H7T0 1116 aa14.91□□□□□ -0.02
ERCC1-203ENST00000340192 TM9SF3Q9HD45 589 aa14.91□□□□□ -0.02
ERCC1-203ENST00000340192 HPCAL4Q9UM19 191 aa14.91□□□□□ -0.02
ERCC1-203ENST00000340192 FCF1Q9Y324 198 aaKnown RBP14.91□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3DA0A087WVF3 549 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3IA0A087WXS9 549 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3EA0A087X179 549 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3KA0A087X1G2 549 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 CXorf51AA0A1B0GTR3 108 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3FA6NER0 549 aaPredicted RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 WASH4PA8MWX3 477 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 C10orf142B7Z368 130 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3LB9A6J9 549 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 RNF103O00237 685 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 KPNA3O00505 521 aaPredicted RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 FGF10O15520 208 aaPredicted RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 SLC7A4O43246 635 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 PLRG1O43660 514 aaKnown RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 PRPSAP2O60256 369 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 OPHN1O60890 802 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 LRCH4O75427 683 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 KCNK5O95279 499 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3HP0C7X1 549 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 MIPP30301 263 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 HNRNPH3P31942 346 aaKnown RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 HTR7P34969 479 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 RECQLP46063 649 aaPredicted RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 CSNK1EP49674 416 aaKnown RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 DNA2P51530 1060 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 CCR5P51681 352 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 GEMIN4P57678 1058 aaKnown RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TPI1P60174 286 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 BNC1Q01954 994 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TRIM14Q14142 442 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 AGBL4Q5VU57 503 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3GQ6DHY5 549 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3CQ6IPX1 549 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 LEKR1Q6ZMV7 388 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 DPY19L3Q6ZPD9 716 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 ZNF354CQ86Y25 554 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 TBC1D3Q8IZP1 549 aaPredicted RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 PCDH20Q8N6Y1 951 aaKnown RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 GRIN3AQ8TCU5 1115 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 SNRNP25Q9BV90 132 aaKnown RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 ZDHHC5Q9C0B5 715 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 DHX35Q9H5Z1 703 aaKnown RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 EBF2Q9HAK2 575 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 OSGEPQ9NPF4 335 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 DNAAF2Q9NVR5 837 aaKnown RBP14.9□□□□□ -0.02
ERCC1-203ENST00000340192 IL36AQ9UHA7 158 aa14.9□□□□□ -0.02
ERCC1-203ENST00000340192 DOCK9Q9BZ29 2069 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 A0A1B0GVT2 93 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 A0A1W2PPC4 97 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 EIF3CLB5ME19 914 aaKnown RBP14.89□□□□□ -0.03
ERCC1-203ENST00000340192 EEF2KO00418 725 aaKnown RBP14.89□□□□□ -0.03
ERCC1-203ENST00000340192 KDELR3O43731 214 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 LEFTY1O75610 366 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 PRNPP04156 253 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 PPP2CBP62714 309 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 PPP2CAP67775 309 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 ARSIQ5FYB1 569 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 CCDC122Q5T0U0 273 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 PSAPL1Q6NUJ1 521 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 ALKBH5Q6P6C2 394 aaKnown RBP14.89□□□□□ -0.03
ERCC1-203ENST00000340192 LAYNQ6UX15 382 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 VSTM4Q8IW00 320 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 UMODL1-AS1Q8N2C9 162 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 ISG20Q96AZ6 181 aaKnown RBP14.89□□□□□ -0.03
ERCC1-203ENST00000340192 ARRDC3Q96B67 414 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 HMCESQ96FZ2 354 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 KCTD15Q96SI1 283 aaPredicted RBP14.89□□□□□ -0.03
ERCC1-203ENST00000340192 EIF3CQ99613 913 aaKnown RBP14.89□□□□□ -0.03
ERCC1-203ENST00000340192 DNAJC7Q99615 494 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 KLC2Q9H0B6 622 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 KDM4CQ9H3R0 1056 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 WASF2Q9Y6W5 498 aa14.89□□□□□ -0.03
ERCC1-203ENST00000340192 RASA4BC9J798 803 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 GIPC1O14908 333 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 RASA4O43374 803 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 BUB1O43683 1085 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 GJB3O75712 270 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 CYP1A2P05177 515 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 CSRP1P21291 193 aaKnown RBP14.88□□□□□ -0.03
ERCC1-203ENST00000340192 PCK1P35558 622 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 EIF4A3P38919 411 aaKnown RBP14.88□□□□□ -0.03
ERCC1-203ENST00000340192 GRIA4P48058 902 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 NOVA1P51513 510 aaKnown RBP14.88□□□□□ -0.03
ERCC1-203ENST00000340192 CCNHP51946 323 aaPredicted RBP14.88□□□□□ -0.03
ERCC1-203ENST00000340192 YBEYP58557 167 aaPredicted RBP14.88□□□□□ -0.03
ERCC1-203ENST00000340192 TAS2R38P59533 333 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 SERINC3Q13530 473 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 ACAP1Q15027 740 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 TEAD4Q15561 434 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 PARP15Q460N3 678 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 CARD16Q5EG05 197 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 PPP6R3Q5H9R7 873 aaPredicted RBP14.88□□□□□ -0.03
ERCC1-203ENST00000340192 PIP5KL1Q5T9C9 394 aa14.88□□□□□ -0.03
ERCC1-203ENST00000340192 PSTKQ8IV42 348 aaKnown RBP14.88□□□□□ -0.03
ERCC1-203ENST00000340192 OR8K1Q8NGG5 319 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms