RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MIB1Q86YT6 1006 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 PIH1D2Q8WWB5 315 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 SLC4A5Q9BY07 1137 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 RHBGQ9H310 441 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 RNPEPL1Q9HAU8 725 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 MSRAQ9UJ68 235 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 RPS2P15880 293 aaKnown RBP12.99□□□□□ -0.33
USP47-202ENST00000339865 GP5P40197 560 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 CRKLP46109 303 aaKnown RBP12.99□□□□□ -0.33
USP47-202ENST00000339865 CDKL4Q5MAI5 379 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 LDLRAP1Q5SW96 308 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 ZNF677Q86XU0 584 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 RP9Q8TA86 221 aaKnown RBP12.99□□□□□ -0.33
USP47-202ENST00000339865 DMRTB1Q96MA1 342 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 CLK4Q9HAZ1 481 aaKnown RBP12.99□□□□□ -0.33
USP47-202ENST00000339865 COMMD3-BMI1R4GMX3 469 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 ECHS1P30084 290 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 ALDH7A1P49419 539 aaKnown RBP12.99□□□□□ -0.33
USP47-202ENST00000339865 CRTC3Q6UUV7 619 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 SYT12Q8IV01 421 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 CYP4X1Q8N118 509 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 HDDC3Q8N4P3 179 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 TEX47Q8TBZ9 253 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 DNAJA4Q8WW22 397 aaPredicted RBP12.99□□□□□ -0.33
USP47-202ENST00000339865 KIAA1683Q9H0B3 1180 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 TIMMDC1Q9NPL8 285 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 KIAA1257Q9ULG3 409 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 COX7A2P14406 83 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 OAFQ86UD1 273 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 SLC34A3Q8N130 599 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 TC2NQ8N9U0 490 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 CHST4Q8NCG5 386 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 ZNF75CPQ92670 426 aaPredicted RBP12.99□□□□□ -0.33
USP47-202ENST00000339865 TP53INP1Q96A56 240 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 MED11Q9P086 117 aa12.99□□□□□ -0.33
USP47-202ENST00000339865 AP2A2O94973 939 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 SLC2A3P11169 496 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 ITGALP20701 1170 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 PDIA6Q15084 440 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 PTGES3Q15185 160 aaKnown RBP12.98□□□□□ -0.33
USP47-202ENST00000339865 OR52K2Q8NGK3 314 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 FICDQ9BVA6 458 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 POMKQ9H5K3 350 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 CCDC177Q9NQR7 707 aaPredicted RBP12.98□□□□□ -0.33
USP47-202ENST00000339865 GCC2Q8IWJ2 1684 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 PLXNC1O60486 1568 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 ITGA4P13612 1032 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 GDI2P50395 445 aaKnown RBP12.98□□□□□ -0.33
USP47-202ENST00000339865 SREBF2Q12772 1141 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 ORC1Q13415 861 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 SETD6Q8TBK2 473 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 EXOC2Q96KP1 924 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 DHRS1Q96LJ7 313 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 PHF24Q9UPV7 400 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 STMND1H3BQB6 276 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 OR10H3O60404 316 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 CCNDBP1O95273 360 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 FAM86B2P0C5J1 330 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 PPM1AP35813 382 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 FOLH1Q04609 750 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 SPDYCQ5MJ68 293 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 SNAP47Q5SQN1 464 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 CMTR2Q8IYT2 770 aaKnown RBP12.98□□□□□ -0.33
USP47-202ENST00000339865 VPS51Q9UID3 782 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 BBOX1O75936 387 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 GHRP10912 638 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 CES1P23141 567 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 MCAMP43121 646 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 UGT2B15P54855 530 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 TAS2R41P59536 307 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 IER5Q5VY09 327 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 WDR59Q6PJI9 974 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 FBXW8Q8N3Y1 598 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 COLGALT1Q8NBJ5 622 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 AKAP1Q92667 903 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP47-202ENST00000339865 TMEM159Q96B96 161 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 GGA3Q9NZ52 723 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 TNFSF13BQ9Y275 285 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 SERPINE1P05121 402 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 LHCGRP22888 699 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 TRIM40Q6P9F5 258 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 SPESP1Q6UW49 350 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 RAD51AP1Q96B01 352 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 GPR108Q9NPR9 543 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 NARSO43776 548 aaKnown RBP12.98□□□□□ -0.33
USP47-202ENST00000339865 PSEN2P49810 448 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 CCR3P51677 355 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 DNASE1L3Q13609 305 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 INTS11Q5TA45 600 aaKnown RBP12.98□□□□□ -0.33
USP47-202ENST00000339865 GRTP1Q5TC63 336 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 GPSM1Q86YR5 675 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 C10orf107Q8IVU9 208 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 OR56A4Q8NGH8 313 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 ELP3Q9H9T3 547 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 SAMHD1Q9Y3Z3 626 aaKnown RBP12.98□□□□□ -0.33
USP47-202ENST00000339865 FANCAO15360 1455 aa12.98□□□□□ -0.33
USP47-202ENST00000339865 GRIN3BO60391 1043 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 NRP2O60462 931 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 ATF7IP2Q5U623 682 aa12.97□□□□□ -0.33
USP47-202ENST00000339865 KCNMB4Q86W47 210 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms