RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SLC25A41Q8N5S1 370 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 UROC1Q96N76 676 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 PANX3Q96QZ0 392 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 BATF3Q9NR55 127 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 CDH9Q9ULB4 789 aa16.6■□□□□ 0.25
LITAF-201ENST00000339430 MAGEC1O60732 1142 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
LITAF-201ENST00000339430 ATP6V1C1P21283 382 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 BRCC3P46736 316 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 RAP1GDS1P52306 607 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 SLC25A3Q00325 362 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 SLC34A1Q06495 639 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 DSC1Q08554 894 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 CD300LGQ6UXG3 332 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 NAPRTQ6XQN6 538 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.59■□□□□ 0.25
LITAF-201ENST00000339430 LRRC74BQ6ZQY2 392 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 CRIPAKQ8N1N5 446 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 MICAL1Q8TDZ2 1067 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 RTP3Q9BQQ7 232 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 CPSF2Q9P2I0 782 aaKnown RBP16.59■□□□□ 0.25
LITAF-201ENST00000339430 DNAJB4Q9UDY4 337 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 DFFAO00273 331 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 SIN3BO75182 1162 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 TM7SF2O76062 418 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 TIMP1P01033 207 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 GRK2P25098 689 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 HCAR3P49019 387 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 CXCR3P49682 368 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 IKBKEQ14164 716 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 TSNAXIP1Q2TAA8 658 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 RABGAP1LQ5R372 815 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 DCLRE1AQ6PJP8 1040 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 RIPOR1Q6ZS17 1223 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 SPATA22Q8NHS9 363 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 CFAP61Q8NHU2 1237 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 PGAP3Q96FM1 320 aaPredicted RBP16.59■□□□□ 0.25
LITAF-201ENST00000339430 ANKRD27Q96NW4 1050 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 CASD1Q96PB1 797 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 FAM193BQ96PV7 902 aaPredicted RBP16.59■□□□□ 0.25
LITAF-201ENST00000339430 TMEM209Q96SK2 561 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 TMLHEQ9NVH6 421 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 SLC7A8Q9UHI5 535 aa16.59■□□□□ 0.25
LITAF-201ENST00000339430 UPP2O95045 317 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 CSF2RAP15509 400 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 RAG1P15918 1043 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 NCF2P19878 526 aaPredicted RBP16.58■□□□□ 0.25
LITAF-201ENST00000339430 SERPINB6P35237 376 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 MPP3Q13368 585 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 TBCCQ15814 346 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 CCDC153Q494R4 210 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 ITPRIPL1Q6GPH6 555 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 CNKSR3Q6P9H4 555 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 FAM43BQ6ZT52 329 aaPredicted RBP16.58■□□□□ 0.25
LITAF-201ENST00000339430 COLGALT2Q8IYK4 626 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 ZNF781Q8N8C0 355 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 SCAMP5Q8TAC9 235 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 SCG3Q8WXD2 468 aaKnown RBP16.58■□□□□ 0.25
LITAF-201ENST00000339430 TEKT5Q96M29 485 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 MAN1C1Q9NR34 630 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 RAD54BQ9Y620 910 aa16.58■□□□□ 0.25
LITAF-201ENST00000339430 CAPN15O75808 1086 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 CIB2O75838 187 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 LUC7L3O95232 432 aaKnown RBP16.58■□□□□ 0.24
LITAF-201ENST00000339430 F9P00740 461 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 C2P06681 752 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 FAM163BP0C2L3 166 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 AOC1P19801 751 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 MAGEA12P43365 314 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 OR1G1P47890 313 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 PEX6Q13608 980 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 DNAL1Q4LDG9 190 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 PDPK2PQ6A1A2 396 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 ANO7Q6IWH7 933 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 SIKE1Q9BRV8 207 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 ADAM28Q9UKQ2 775 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 TRHDEQ9UKU6 1024 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 SLC39A10Q9ULF5 831 aa16.58■□□□□ 0.24
LITAF-201ENST00000339430 ZNF195O14628 629 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 KIAA0355O15063 1070 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 MT-CYBP00156 380 aaPredicted RBP16.57■□□□□ 0.24
LITAF-201ENST00000339430 PCSK1P29120 753 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 RFC2P35250 354 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 RALGPS1Q5JS13 557 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 C1orf146Q5VVC0 180 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 RAPH1Q70E73 1250 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 CNTD1Q8N815 330 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 DQX1Q8TE96 717 aaKnown RBP16.57■□□□□ 0.24
LITAF-201ENST00000339430 VPS39Q96JC1 886 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 OSBPL1AQ9BXW6 950 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 STX18Q9P2W9 335 aaKnown RBP16.57■□□□□ 0.24
LITAF-201ENST00000339430 HCSTQ9UBK5 93 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 PRG3Q9Y2Y8 225 aaPredicted RBP16.57■□□□□ 0.24
LITAF-201ENST00000339430 G3V2L1 256 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 HSPA4LO95757 839 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 ATP5BP06576 529 aaKnown RBP16.57■□□□□ 0.24
LITAF-201ENST00000339430 CPOXP36551 454 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 AVPR1AP37288 418 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 HARS2P49590 506 aaKnown RBP16.57■□□□□ 0.24
LITAF-201ENST00000339430 BLMHQ13867 455 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms