RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 AGGF1Q8N302 714 aaeCLIP14.95□□□□□ -0.02
CBX3-201ENST00000337620 CELF5Q8N6W0 485 aaKnown RBP14.95□□□□□ -0.02
CBX3-201ENST00000337620 ZNF599Q96NL3 588 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 WDR83Q9BRX9 315 aaKnown RBP14.95□□□□□ -0.02
CBX3-201ENST00000337620 FEM1AQ9BSK4 669 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 ACE2Q9BYF1 805 aaPredicted RBP14.95□□□□□ -0.02
CBX3-201ENST00000337620 PRO3102Q9H379 93 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 CENPHQ9H3R5 247 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 OGFRQ9NZT2 677 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 TBC1D14Q9P2M4 693 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 UBA2Q9UBT2 640 aaPredicted RBP14.95□□□□□ -0.02
CBX3-201ENST00000337620 CLEC4EQ9ULY5 219 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 WNT6Q9Y6F9 365 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 TEX264Q9Y6I9 313 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 GOLGA6L10A6NI86 522 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 ERI2A8K979 691 aaKnown RBP14.95□□□□□ -0.02
CBX3-201ENST00000337620 ANXA9O76027 345 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 VIPR2P41587 438 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 CCDC38Q502W7 563 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 FYB2Q5VWT5 728 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 KCTD11Q693B1 232 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 DNAAF3Q8N9W5 541 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 OR52K1Q8NGK4 314 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 FGF13Q92913 245 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 APOL2Q9BQE5 337 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 SLC25A51Q9H1U9 297 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 LRRC40Q9H9A6 602 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 MED4Q9NPJ6 270 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 MAD1L1Q9Y6D9 718 aa14.95□□□□□ -0.02
CBX3-201ENST00000337620 CHD5Q8TDI0 1954 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 TLDC2A0PJX2 215 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 TTC24A2A3L6 582 aaPredicted RBP14.94□□□□□ -0.02
CBX3-201ENST00000337620 SMIM23A6NLE4 172 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 PSMD3O43242 534 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 SNAP91O60641 907 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 SUN1O94901 812 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 MLNP12872 115 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 SSTR1P30872 391 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 MAGEA3P43357 314 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 IFNAR2P48551 515 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 GEMP55040 296 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 GPX6P59796 221 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 KRT71Q3SY84 523 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 C3orf62Q6ZUJ4 267 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 KRT222Q8N1A0 295 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 BBS5Q8N3I7 341 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 MPP5Q8N3R9 675 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 PGBD5Q8N414 524 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 ATP11CQ8NB49 1132 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 IPMKQ8NFU5 416 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 SH3GL2Q99962 352 aa14.94□□□□□ -0.02
CBX3-201ENST00000337620 A0A087WUV0 522 aaPredicted RBP14.93□□□□□ -0.02
CBX3-201ENST00000337620 NEDD8-MDP1E9PL57 170 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 PMPCBO75439 489 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 CPP00450 1065 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 MYZAPP0CAP1 466 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 TCF3P15923 654 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 CD86P42081 329 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 DSC2Q02487 901 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 ADAM15Q13444 863 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 SKIDA1Q1XH10 827 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 FAM78AQ5JUQ0 283 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 CASC4Q6P4E1 433 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 LINGO4Q6UY18 593 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 KDELC2Q7Z4H8 507 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 ST13P5Q8NFI4 369 aaPredicted RBP14.93□□□□□ -0.02
CBX3-201ENST00000337620 FIBINQ8TAL6 211 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 IRF7Q92985 503 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 CFAP36Q96G28 342 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 SIGLEC10Q96LC7 697 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 LRRC3BQ96PB8 259 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 PPP1R2P1Q96PQ5 205 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 BBS2Q9BXC9 721 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 KIF9Q9HAQ2 790 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 SPHK2Q9NRA0 654 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 KIAA1522Q9P206 1035 aaPredicted RBP14.93□□□□□ -0.02
CBX3-201ENST00000337620 ZC3H7BQ9UGR2 993 aaKnown RBP14.93□□□□□ -0.02
CBX3-201ENST00000337620 XIRP2A4UGR9 3374 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 SDR42E2A6NKP2 422 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 MGAT1P26572 445 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 OAS2P29728 719 aaKnown RBP14.93□□□□□ -0.02
CBX3-201ENST00000337620 PHBP35232 272 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 CRADDP78560 199 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 NIPAL4Q0D2K0 466 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 LMAN2Q12907 356 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 LY6G5CQ5SRR4 150 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 NAPEPLDQ6IQ20 393 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 ADGRG2Q8IZP9 1017 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 APCDD1Q8J025 514 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 ARL8AQ96BM9 186 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 LRRC39Q96DD0 335 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 RSPRY1Q96DX4 576 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 IMP4Q96G21 291 aaKnown RBP14.93□□□□□ -0.02
CBX3-201ENST00000337620 ASB16Q96NS5 453 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 CCDC77Q9BR77 488 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 CINPQ9BW66 212 aaPredicted RBP14.93□□□□□ -0.02
CBX3-201ENST00000337620 POLR1EQ9GZS1 481 aaKnown RBP14.93□□□□□ -0.02
CBX3-201ENST00000337620 BCCIPQ9P287 314 aaKnown RBP eCLIP14.93□□□□□ -0.02
CBX3-201ENST00000337620 SEPT3Q9UH03 358 aa14.93□□□□□ -0.02
CBX3-201ENST00000337620 OR51B4Q9Y5P0 310 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms