RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 PPP4R1Q8TF05 950 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 PSMG2Q969U7 264 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 MTBPQ96DY7 904 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 SCLYQ96I15 445 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CASS4Q9NQ75 786 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 C15orf41Q9Y2V0 281 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 Q9Y3F1 56 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 NYNRINQ9P2P1 1898 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 UNCXA6NJT0 531 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 ZNF487B1APH4 448 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 SNNO75324 88 aaPredicted RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 EPHA3P29320 983 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CCR1P32246 355 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 SLC8A1P32418 973 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 RPL9P32969 192 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 SERPINB6P35237 376 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 SERPINB5P36952 375 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 SCAPQ12770 1279 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 DSC3Q14574 896 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CCDC6Q16204 474 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 TCTN1Q2MV58 587 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CTXN3Q4LDR2 81 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 PPM1LQ5SGD2 360 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 C10orf120Q5SQS8 335 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 VARS2Q5ST30 1063 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 PM20D1Q6GTS8 502 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CNSTQ6PJW8 725 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 IGSF8Q969P0 613 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 FAM193BQ96PV7 902 aaPredicted RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 OR52B2Q96RD2 323 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 TBL1YQ9BQ87 522 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CHD7Q9P2D1 2997 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 PLA2G4CQ9UP65 541 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 MYO16Q9Y6X6 1858 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 TNFRSF10BO14763 440 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 ADAM12O43184 909 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CCDC22O60826 627 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 IGHA2P01877 340 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 MLNP12872 115 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 ACVRL1P37023 503 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 SLC1A2P43004 574 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 KCNQ1P51787 676 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 LIMK2P53671 638 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CLNS1AP54105 237 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 NAGLUP54802 743 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 PDCD2Q16342 344 aaPredicted RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 SPANXN3Q5MJ09 141 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 DCLRE1AQ6PJP8 1040 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 C4orf50Q6ZRC1 276 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 MRPL10Q7Z7H8 261 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 TMEM135Q86UB9 458 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 PIWIL2Q8TC59 973 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 NXNL1Q96CM4 212 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 ELMO2Q96JJ3 720 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 CPNE1Q99829 537 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 NOL6Q9H6R4 1146 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 THAP1Q9NVV9 213 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 NOP53Q9NZM5 478 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 IPO11Q9UI26 975 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 MCM8Q9UJA3 840 aa8.99□□□□□ -0.97
SNCA-201ENST00000336904 RUVBL2Q9Y230 463 aaKnown RBP8.99□□□□□ -0.97
SNCA-201ENST00000336904 F9P00740 461 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 TPBGLP0DKB5 382 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 IRF1P10914 325 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 HNRNPLP14866 589 aaKnown RBP eCLIP8.98□□□□□ -0.97
SNCA-201ENST00000336904 MX2P20592 715 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 ARNTP27540 789 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 SPRP35270 261 aaPredicted RBP8.98□□□□□ -0.97
SNCA-201ENST00000336904 PTDSS1P48651 473 aaKnown RBP8.98□□□□□ -0.97
SNCA-201ENST00000336904 IDH3AP50213 366 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 CDH17Q12864 832 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 DLG1Q12959 904 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 TAF10Q12962 218 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 DUSP4Q13115 394 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 GALNT3Q14435 633 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 TCHHL1Q5QJ38 904 aaPredicted RBP8.98□□□□□ -0.97
SNCA-201ENST00000336904 RASIP1Q5U651 963 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 NXNQ6DKJ4 435 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 DBF4BQ8NFT6 615 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 SUSD3Q96L08 255 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 C7orf26Q96N11 449 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 SLC9A7Q96T83 725 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 TTC1Q99614 292 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 NUF2Q9BZD4 464 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 WWP1Q9H0M0 922 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 RNPEPL1Q9HAU8 725 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 GLOD4Q9HC38 313 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 EIF2B3Q9NR50 452 aaKnown RBP8.98□□□□□ -0.97
SNCA-201ENST00000336904 CRYL1Q9Y2S2 319 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 MYO7AQ13402 2215 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 SLC12A8A0AV02 714 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 G3V2L1 256 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 M0QZQ0 153 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 ZBTB14O43829 449 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 BAG2O95816 211 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 GLDCP23378 1020 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 CCND1P24385 295 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 SKIV2L2P42285 1042 aaKnown RBP8.98□□□□□ -0.97
SNCA-201ENST00000336904 RASSF2P50749 326 aa8.98□□□□□ -0.97
SNCA-201ENST00000336904 CCL23P55773 120 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms