RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ALDH9A1P49189 494 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 SPIRE1Q08AE8 756 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 CNGA3Q16281 694 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 ATP6AP1LQ52LC2 224 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 MILR1Q7Z6M3 343 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 KREMEN2Q8NCW0 462 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 OR8D1Q8WZ84 308 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 FBXO6Q9NRD1 293 aaPredicted RBP15.22■□□□□ 0.03
C9orf47-201ENST00000334490 CACNA2D2Q9NY47 1150 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 APPL1Q9UKG1 709 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 PCDHGC3Q9UN70 934 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 GABRQQ9UN88 632 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 TMEM114B3SHH9 223 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 M0R2N6 131 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 MLNP12872 115 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 GPSM1Q86YR5 675 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 IRGQQ8WZA9 623 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 CSPG4P5Q96PW8 444 aa15.22■□□□□ 0.03
C9orf47-201ENST00000334490 PPP1R10Q96QC0 940 aaKnown RBP15.22■□□□□ 0.03
C9orf47-201ENST00000334490 TPST1O60507 370 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 SNAI1O95863 264 aaPredicted RBP15.21■□□□□ 0.03
C9orf47-201ENST00000334490 TARSP26639 723 aaKnown RBP15.21■□□□□ 0.03
C9orf47-201ENST00000334490 IFI35P80217 286 aaPredicted RBP15.21■□□□□ 0.03
C9orf47-201ENST00000334490 SULT2A1Q06520 285 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 CYP51A1Q16850 503 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 TMEM63BQ5T3F8 832 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 SAPCD2Q86UD0 394 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 OR56A4Q8NGH8 313 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 PLEKHA8Q96JA3 519 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 CEP19Q96LK0 163 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 FAM126AQ9BYI3 521 aaPredicted RBP15.21■□□□□ 0.03
C9orf47-201ENST00000334490 TMPRSS4Q9NRS4 437 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 POLG2Q9UHN1 485 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 UBDO15205 165 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 LPOP22079 712 aaPredicted RBP15.21■□□□□ 0.03
C9orf47-201ENST00000334490 ADRA1DP25100 572 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 NFYCQ13952 458 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 FLOT2Q14254 428 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 GALNT3Q14435 633 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 SH3BP4Q9P0V3 963 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 NR5A2O00482 541 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 HSPA1AP0DMV8 641 aaKnown RBP15.21■□□□□ 0.03
C9orf47-201ENST00000334490 HSPA1BP0DMV9 641 aaKnown RBP15.21■□□□□ 0.03
C9orf47-201ENST00000334490 PTPN2P17706 415 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 ZNF844Q08AG5 666 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 DMC1Q14565 340 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 PTPRNQ16849 979 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 HORMAD1Q86X24 394 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 FAM124BQ9H5Z6 455 aaPredicted RBP15.21■□□□□ 0.03
C9orf47-201ENST00000334490 ANKRD6Q9Y2G4 727 aa15.21■□□□□ 0.03
C9orf47-201ENST00000334490 NRP1O14786 923 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 LRCH4O75427 683 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 BAIAP3O94812 1187 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 NFATC1O95644 943 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 F2P00734 622 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 WARSP23381 471 aaKnown RBP15.2■□□□□ 0.02
C9orf47-201ENST00000334490 TRIP10Q15642 601 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 ZC3H12BQ5HYM0 836 aaKnown RBP15.2■□□□□ 0.02
C9orf47-201ENST00000334490 HGSNATQ68CP4 663 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 ARL14EPQ8N8R7 260 aaPredicted RBP15.2■□□□□ 0.02
C9orf47-201ENST00000334490 OPTCQ9UBM4 332 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 ZMYM5Q9UJ78 669 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 RAB21Q9UL25 225 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 PADI4Q9UM07 663 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 TACR2P21452 398 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 SKIV2L2P42285 1042 aaKnown RBP15.2■□□□□ 0.02
C9orf47-201ENST00000334490 TTPAP49638 278 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 PPP2R2DQ66LE6 453 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 PTPRHQ9HD43 1115 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 NDOR1Q9UHB4 597 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 SH3BGRLO75368 114 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 CES1P23141 567 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 SLC1A6P48664 564 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 AGKQ53H12 422 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 ZNF662Q6ZS27 426 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 FAM124AQ86V42 546 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 MAGEC3Q8TD91 643 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 DACH2Q96NX9 599 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 TRIM4Q9C037 500 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 KLC4Q9NSK0 619 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 A0A0U1RQF3 1178 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 GRM6O15303 877 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 ZW10O43264 779 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 DNTTP04053 509 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 FSTL1Q12841 308 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 PPP1R15BQ5SWA1 713 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 STXBP5Q5T5C0 1151 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 AFTPHQ6ULP2 937 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 MON1BQ7L1V2 547 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 CPA6Q8N4T0 437 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 FNIP1Q8TF40 1166 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 TMEM120AQ9BXJ8 343 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 UNC93B1Q9H1C4 597 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 ADNPQ9H2P0 1102 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 TCF7L2Q9NQB0 619 aa15.2■□□□□ 0.02
C9orf47-201ENST00000334490 ZNF142P52746 1687 aaPredicted RBP15.19■□□□□ 0.02
C9orf47-201ENST00000334490 HTR1BP28222 390 aa15.19■□□□□ 0.02
C9orf47-201ENST00000334490 CYLC2Q14093 348 aaPredicted RBP15.19■□□□□ 0.02
C9orf47-201ENST00000334490 ZNF555Q8NEP9 628 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms