RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 UNKQ9C0B0 810 aaKnown RBP12.05□□□□□ -0.48
LIMK2-202ENST00000333611 ZNF358Q9NW07 568 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 WDR27A2RRH5 827 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 CAPN14A8MX76 684 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 APOL1O14791 398 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 SNPHO15079 494 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 MED7O43513 233 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 MICAL2O94851 1124 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 BMP10O95393 424 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 LSM8O95777 96 aaKnown RBP12.05□□□□□ -0.48
LIMK2-202ENST00000333611 STAT5BP51692 787 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 ATXN1P54253 815 aaKnown RBP12.05□□□□□ -0.48
LIMK2-202ENST00000333611 MRPS5P82675 430 aaKnown RBP12.05□□□□□ -0.48
LIMK2-202ENST00000333611 TFDP2Q14188 446 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 NDUFA5Q16718 116 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 FSCBQ5H9T9 825 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 ABHD15Q6UXT9 468 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 BPHLQ86WA6 291 aaPredicted RBP12.05□□□□□ -0.48
LIMK2-202ENST00000333611 DCLK2Q8N568 766 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 LZTR1Q8N653 840 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 NATD1Q8N6N6 113 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 LENG8Q96PV6 779 aaPredicted RBP12.05□□□□□ -0.48
LIMK2-202ENST00000333611 CHID1Q9BWS9 393 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 HIPK3Q9H422 1215 aa12.05□□□□□ -0.48
LIMK2-202ENST00000333611 WDR55Q9H6Y2 383 aaPredicted RBP12.05□□□□□ -0.48
LIMK2-202ENST00000333611 C3orf70A6NLC5 250 aaPredicted RBP12.04□□□□□ -0.48
LIMK2-202ENST00000333611 H3BMQ9 156 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 DENRO43583 198 aaKnown RBP12.04□□□□□ -0.48
LIMK2-202ENST00000333611 TRUB2O95900 331 aaKnown RBP12.04□□□□□ -0.48
LIMK2-202ENST00000333611 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
LIMK2-202ENST00000333611 MT-ND1P03886 318 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 GNAO1P09471 354 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 CA9Q16790 459 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 ZIK1Q3SY52 487 aaPredicted RBP12.04□□□□□ -0.48
LIMK2-202ENST00000333611 XYLT1Q86Y38 959 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 SCUBE3Q8IX30 993 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 NIM1KQ8IY84 436 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 LILRA2Q8N149 483 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.04□□□□□ -0.48
LIMK2-202ENST00000333611 BHMTQ93088 406 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 COG8Q96MW5 612 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 DACH2Q96NX9 599 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 DEPDC7Q96QD5 511 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 CCDC106Q9BWC9 280 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 OSBPL11Q9BXB4 747 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 PNPLA3Q9NST1 481 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 KLQ9UEF7 1012 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 NUDT5Q9UKK9 219 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 TEX264Q9Y6I9 313 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 MT-CO1P00395 513 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 MYCP01106 439 aaPredicted RBP12.04□□□□□ -0.48
LIMK2-202ENST00000333611 NFICP08651 508 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 GPD1P21695 349 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 PMS2P3Q13401 168 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 SLC22A16Q86VW1 577 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 LPAR1Q92633 364 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 NRBP2Q9NSY0 501 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 PAK5Q9P286 719 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 RNF11Q9Y3C5 154 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 TTLL3Q9Y4R7 772 aa12.04□□□□□ -0.48
LIMK2-202ENST00000333611 RNASEH2AO75792 299 aaKnown RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 ADORA2AP29274 412 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 TYK2P29597 1187 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 HSPA13P48723 471 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 CLCN3P51790 818 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 GBE1Q04446 702 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 PTPN11Q06124 597 aaPredicted RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 CEP78Q5JTW2 689 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 NBPF12Q5TAG4 269 aaPredicted RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 KCTD8Q6ZWB6 473 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 IFNEQ86WN2 208 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 WDR49Q8IV35 697 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 TTC16Q8NEE8 873 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 OR7G1Q8NGA0 311 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 LILRB4Q8NHJ6 448 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 TFB1MQ8WVM0 346 aaKnown RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 CDH19Q9H159 772 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 RPF1Q9H9Y2 349 aaKnown RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 H0Y858 1186 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 H3BNX3 289 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 FARP2O94887 1054 aaPredicted RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 STBD1O95210 358 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 METTL18O95568 372 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 SLC1A6P48664 564 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 PGGT1BP53609 377 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 PRPSAP1Q14558 356 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 MAPRE1Q15691 268 aaKnown RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 TAF12Q16514 161 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 SNAP47Q5SQN1 464 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 BNIPLQ7Z465 357 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 CMC1Q7Z7K0 106 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 ADCK1Q86TW2 530 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 CHSY1Q86X52 802 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 POC5Q8NA72 575 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 PIWIL2Q8TC59 973 aaKnown RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 BIRC8Q96P09 236 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 B3GNT5Q9BYG0 378 aa12.03□□□□□ -0.48
LIMK2-202ENST00000333611 MRPL42Q9Y6G3 142 aaKnown RBP12.03□□□□□ -0.48
LIMK2-202ENST00000333611 FOCADQ5VW36 1801 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms