RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 FYNP06241 537 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CTSHP09668 335 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 TFEBP19484 476 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CD68P34810 354 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FLOT2Q14254 428 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 LPCAT4Q643R3 524 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 BNC2Q6ZN30 1099 aaPredicted RBP11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ADGRG6Q86SQ4 1221 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 TBL1YQ9BQ87 522 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 UBE2OQ9C0C9 1292 aaKnown RBP11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CATSPERBQ9H7T0 1116 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 C9IYK1 514 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ODC1P11926 461 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 BDNFP23560 247 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PIK3R1P27986 724 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PAPOLAP51003 745 aaKnown RBP11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GJA9P57773 515 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PAN2Q504Q3 1202 aaKnown RBP11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 BTBD8Q5XKL5 378 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 TAF2Q6P1X5 1199 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ZYG11AQ6WRX3 759 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GPRIN1Q7Z2K8 1008 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ANKRD23Q86SG2 305 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SLC41A1Q8IVJ1 513 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SPATA22Q8NHS9 363 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 TRAPPC9Q96Q05 1148 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GPR22Q99680 433 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FICDQ9BVA6 458 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 NCKIPSDQ9NZQ3 722 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PACSIN3Q9UKS6 424 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 BRCA1P38398 1863 aaKnown RBP11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ZBTB14O43829 449 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ARRB2P32121 409 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 HK2P52789 917 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GEMP55040 296 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ITKQ08881 620 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CTBP1Q13363 440 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 RARS2Q5T160 578 aaKnown RBP11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ZC3HC1Q86WB0 502 aaKnown RBP11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ARHGAP18Q8N392 663 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GATA6Q92908 595 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ISL2Q96A47 359 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SGF29Q96ES7 293 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CATSPER2Q96P56 530 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CDRT15Q96T59 188 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FAM192AQ9GZU8 254 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 DRC3Q9H069 523 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FAM105AQ9NUU6 356 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 XPR1Q9UBH6 696 aa11.88□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 AHCYL1O43865 530 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 MOCS2O96007 188 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CXCR3P49682 368 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 RAB10P61026 200 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FRG1Q14331 258 aaKnown RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 THEMIS2Q5TEJ8 643 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PKN3Q6P5Z2 889 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 TAC4Q86UU9 113 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 LCA5Q86VQ0 697 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 RNF135Q8IUD6 432 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 RP9Q8TA86 221 aaKnown RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 MYLPFQ96A32 169 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PPP1R2P1Q96PQ5 205 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PPP1R10Q96QC0 940 aaKnown RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 UNKQ9C0B0 810 aaKnown RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 EFCAB1Q9HAE3 211 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 EPS15L1Q9UBC2 864 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PRPF19Q9UMS4 504 aaKnown RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FAM95CA0A1B0GW59 222 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 MATN2O00339 956 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 MT-CYBP00156 380 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PRKCGP05129 697 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PEX2P28328 305 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PPARGP37231 505 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 MAGEA12P43365 314 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SCNN1GP51170 649 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GRIK3Q13003 919 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 LSM12Q3MHD2 195 aaKnown RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 KCTD11Q693B1 232 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 KLC3Q6P597 504 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 FSTL5Q8N475 847 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 LPPQ93052 612 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 PGAP3Q96FM1 320 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 EBF3Q9H4W6 596 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 DMAP1Q9NPF5 467 aaPredicted RBP11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ANLNQ9NQW6 1124 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CHST12Q9NRB3 414 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CPA4Q9UI42 421 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 DTNAQ9Y4J8 743 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 ZNF195O14628 629 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 GPC4O75487 556 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 COL6A2P12110 1019 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CYP2C18P33260 490 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 XIAPP98170 497 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 SEMA3BQ13214 749 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CCNIQ14094 377 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 CNGA3Q16281 694 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 KIAA0319Q5VV43 1072 aa11.87□□□□□ -0.51
CSPG4P4Y-201ENST00000333235 OLFML2BQ68BL8 750 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms