RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 SCML1Q9UN30 329 aa20.92■□□□□ 0.94
MRPL40-201ENST00000333130 ALOX15BO15296 676 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 KIF5CO60282 957 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 ZFXP17010 805 aaPredicted RBP20.91■□□□□ 0.94
MRPL40-201ENST00000333130 PTPN7P35236 360 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 COPS2P61201 443 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 TFDP3Q5H9I0 405 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 DCAF12L1Q5VU92 463 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 NCBP2-AS2Q69YL0 99 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 SLC9A4Q6AI14 798 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 ARHGAP12Q8IWW6 846 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 FRS2Q8WU20 508 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 GAB3Q8WWW8 586 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 SLC39A8Q9C0K1 460 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 MKRN2Q9H000 416 aaKnown RBP20.91■□□□□ 0.94
MRPL40-201ENST00000333130 MFHAS1Q9Y4C4 1052 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 R4GN57 208 aa20.91■□□□□ 0.94
MRPL40-201ENST00000333130 BNIP3LO60238 219 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 LILRB5O75023 590 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 MT-CO1P00395 513 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 CETN2P41208 172 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 NBL1P41271 181 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 PAPOLAP51003 745 aaKnown RBP20.9■□□□□ 0.94
MRPL40-201ENST00000333130 COPAP53621 1224 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 PAFAH1B3Q15102 231 aaKnown RBP20.9■□□□□ 0.94
MRPL40-201ENST00000333130 INO80DQ53TQ3 878 aaPredicted RBP20.9■□□□□ 0.94
MRPL40-201ENST00000333130 C9orf64Q5T6V5 341 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 Q6ZVU0 165 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 LRRC49Q8IUZ0 686 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 CCDC50Q8IVM0 306 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 ATPAF2Q8N5M1 289 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 NSMCE1Q8WV22 266 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 PTPRN2Q92932 1015 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 ISG20Q96AZ6 181 aaKnown RBP20.9■□□□□ 0.94
MRPL40-201ENST00000333130 TLR10Q9BXR5 811 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 RSPH9Q9H1X1 276 aaPredicted RBP20.9■□□□□ 0.94
MRPL40-201ENST00000333130 FAM86C1Q9NVL1 165 aa20.9■□□□□ 0.94
MRPL40-201ENST00000333130 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.9■□□□□ 0.94
MRPL40-201ENST00000333130 UBA2Q9UBT2 640 aaPredicted RBP20.9■□□□□ 0.94
MRPL40-201ENST00000333130 hCG_1818297A0A087WSY0 165 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 C1QTNF3-AMACRE9PGA6 284 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 ADH1BP00325 375 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 DNA2P51530 1060 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 NHLH1Q02575 133 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 FAM46CQ5VWP2 391 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 CACUL1Q86Y37 369 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 PLD5Q8N7P1 536 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 TRIM44Q96DX7 344 aaPredicted RBP20.89■□□□□ 0.93
MRPL40-201ENST00000333130 RAPGEFL1Q9UHV5 662 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 EFR3BQ9Y2G0 817 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 ZKSCAN5Q9Y2L8 839 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 JRKLQ9Y4A0 524 aa20.89■□□□□ 0.93
MRPL40-201ENST00000333130 K7ERQ8 282 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 MAP3K13O43283 966 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 PRAMEF11O60813 436 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 PYGMP11217 842 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 MSNP26038 577 aaKnown RBP20.88■□□□□ 0.93
MRPL40-201ENST00000333130 SNRPD1P62314 119 aaKnown RBP20.88■□□□□ 0.93
MRPL40-201ENST00000333130 IL10RBQ08334 325 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 TFDP2Q14188 446 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 SIM2Q14190 667 aaPredicted RBP20.88■□□□□ 0.93
MRPL40-201ENST00000333130 RPS6KA1Q15418 735 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 ELF2Q15723 593 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 ZNF569Q5MCW4 686 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 SLC36A4Q6YBV0 504 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 PRR23BQ6ZRT6 265 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 RFX6Q8HWS3 928 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 STK40Q8N2I9 435 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 SLC35F6Q8N357 371 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 BBS5Q8N3I7 341 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 C17orf53Q8N3J3 647 aaPredicted RBP20.88■□□□□ 0.93
MRPL40-201ENST00000333130 MTG2Q9H4K7 406 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 HAUS2Q9NVX0 235 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 IPO11Q9UI26 975 aaKnown RBP20.88■□□□□ 0.93
MRPL40-201ENST00000333130 NCKAP1Q9Y2A7 1128 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 FCF1Q9Y324 198 aaKnown RBP20.88■□□□□ 0.93
MRPL40-201ENST00000333130 THADAQ6YHU6 1953 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 CEP192Q8TEP8 1941 aa20.88■□□□□ 0.93
MRPL40-201ENST00000333130 APOL1O14791 398 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 MCF2LO15068 1137 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 SMAD6O43541 496 aaKnown RBP20.87■□□□□ 0.93
MRPL40-201ENST00000333130 MFSD11O43934 449 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 TMCC1O94876 653 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 IL1BP01584 269 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 VAV1P15498 845 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 MX2P20592 715 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 OXTRP30559 389 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 P2RY2P41231 377 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 RHOAP61586 193 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 RPS14P62263 151 aaKnown RBP20.87■□□□□ 0.93
MRPL40-201ENST00000333130 RAD51Q06609 339 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 RFTN1Q14699 578 aaPredicted RBP20.87■□□□□ 0.93
MRPL40-201ENST00000333130 CST6Q15828 149 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 TMCO4Q5TGY1 634 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 MMAAQ8IVH4 418 aaKnown RBP20.87■□□□□ 0.93
MRPL40-201ENST00000333130 GANCQ8TET4 914 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 ZNF599Q96NL3 588 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 SLC6A17Q9H1V8 727 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 CARD9Q9H257 536 aa20.87■□□□□ 0.93
MRPL40-201ENST00000333130 EPC1Q9H2F5 836 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms