RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CARD16Q5EG05 197 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 WDR45BQ5MNZ6 344 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 PLA2G2CQ5R387 149 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 C22orf39Q6P5X5 142 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 SYT12Q8IV01 421 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 KIAA2013Q8IYS2 634 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 HDDC3Q8N4P3 179 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 SPC24Q8NBT2 197 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 KCTD6Q8NC69 237 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 TMIEQ8NEW7 156 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 OR2A12Q8NGT7 310 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 PIGKQ92643 395 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 HMCESQ96FZ2 354 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 BAG1Q99933 345 aaPredicted RBP14.29□□□□□ -0.12
LIMS1-201ENST00000332345 LRRC19Q9H756 370 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 RCOR3Q9P2K3 495 aaPredicted RBP14.29□□□□□ -0.12
LIMS1-201ENST00000332345 PI4KAP42356 2102 aa14.29□□□□□ -0.12
LIMS1-201ENST00000332345 A0A1W2PP55 124 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 METTL12A8MUP2 240 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 RNASEH2AO75792 299 aaKnown RBP14.28□□□□□ -0.12
LIMS1-201ENST00000332345 SEMA4FO95754 770 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 CD160O95971 181 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 PRNPP04156 253 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 TGM1P22735 817 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 AMPD1P23109 780 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 CHRNA3P32297 505 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 ACSL1P33121 698 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 HOXD12P35452 270 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 SLC1A1P43005 524 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 DPYSQ14117 519 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 NUMA1Q14980 2115 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 PDK2Q15119 407 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 ZFYVE27Q5T4F4 411 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 TXNRD3NBQ6F5E7 133 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 TMCO3Q6UWJ1 677 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 ARMCX6Q7L4S7 300 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 RABEPKQ7Z6M1 372 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 RGL4Q8IZJ4 473 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 C12orf50Q8NA57 414 aaPredicted RBP14.28□□□□□ -0.12
LIMS1-201ENST00000332345 CEP76Q8TAP6 659 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 PIP4K2CQ8TBX8 421 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 CELF6Q96J87 481 aaKnown RBP14.28□□□□□ -0.12
LIMS1-201ENST00000332345 HSPA12BQ96MM6 686 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 CSPG4P5Q96PW8 444 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 SLC39A8Q9C0K1 460 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 NEUROG2Q9H2A3 272 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 TNKS2Q9H2K2 1166 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 PCDH18Q9HCL0 1135 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 PARD6AQ9NPB6 346 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 IL36AQ9UHA7 158 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 FZD4Q9ULV1 537 aa14.28□□□□□ -0.12
LIMS1-201ENST00000332345 FCF1Q9Y324 198 aaKnown RBP14.28□□□□□ -0.12
LIMS1-201ENST00000332345 ZNF292O60281 2723 aa14.27□□□□□ -0.12
LIMS1-201ENST00000332345 SOWAHDA6NJG2 315 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 LRRC72A6NJI9 287 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 MEI4A8MW99 385 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 PRR5-ARHGAP8B1AHC4 643 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 KHNYNO15037 678 aaKnown RBP14.27□□□□□ -0.13
LIMS1-201ENST00000332345 ZNF821O75541 412 aaPredicted RBP14.27□□□□□ -0.13
LIMS1-201ENST00000332345 ITPKAP23677 461 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 PAPOLAP51003 745 aaKnown RBP14.27□□□□□ -0.13
LIMS1-201ENST00000332345 HADHBP55084 474 aaKnown RBP14.27□□□□□ -0.13
LIMS1-201ENST00000332345 SNRPD1P62314 119 aaKnown RBP14.27□□□□□ -0.13
LIMS1-201ENST00000332345 ARHGAP8P85298 464 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 CCDC6Q16204 474 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 AFMIDQ63HM1 303 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.27□□□□□ -0.13
LIMS1-201ENST00000332345 LEKR1Q6ZMV7 388 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 DPY19L3Q6ZPD9 716 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 SLC41A1Q8IVJ1 513 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 FAM71BQ8TC56 605 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 CALR3Q96L12 384 aaKnown RBP14.27□□□□□ -0.13
LIMS1-201ENST00000332345 HEPHQ9BQS7 1158 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 KLC2Q9H0B6 622 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 DYRK4Q9NR20 520 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 PILRBQ9UKJ0 227 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 SARDHQ9UL12 918 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 GVINP1Q7Z2Y8 2422 aa14.27□□□□□ -0.13
LIMS1-201ENST00000332345 A0A0A6YYK5 440 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-201ENST00000332345 DFFAO00273 331 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 KPNA3O00505 521 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-201ENST00000332345 SLC7A4O43246 635 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 POP4O95707 220 aaKnown RBP14.26□□□□□ -0.13
LIMS1-201ENST00000332345 GSRP00390 522 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 GNSP15586 552 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 SERPINB6P35237 376 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 GJC1P36383 396 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 TAS2R40P59535 323 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 LMNB2Q03252 620 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 RAD51Q06609 339 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 ATP13A4Q4VNC1 1196 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 ODF2Q5BJF6 829 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 ARSIQ5FYB1 569 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 DCAF12L1Q5VU92 463 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 PRR23CQ6ZRP0 262 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 TXLNBQ8N3L3 684 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 RYBPQ8N488 228 aaPredicted RBP14.26□□□□□ -0.13
LIMS1-201ENST00000332345 AADATQ8N5Z0 425 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 CHST14Q8NCH0 376 aa14.26□□□□□ -0.13
LIMS1-201ENST00000332345 OR2AP1Q8NGE2 309 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms