RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ITGAVP06756 1048 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 CTPS1P17812 591 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 RECQLP46063 649 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 MLLT6P55198 1093 aaPredicted RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 EIF3BP55884 814 aaKnown RBP16.16■□□□□ 0.18
PDGFB-201ENST00000331163 RHOAP61586 193 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 MXRA7P84157 204 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 BBS7Q8IWZ6 715 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 SORCS1Q8WY21 1168 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 SCYL1Q96KG9 808 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 TMEM237Q96Q45 408 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 LINC00597Q9H2U6 94 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 CHKBQ9Y259 395 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 VCANP13611 3396 aa16.16■□□□□ 0.18
PDGFB-201ENST00000331163 XYLBO75191 536 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 PMLP29590 882 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 SLC12A2P55011 1212 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 IRX1P78414 480 aaPredicted RBP16.15■□□□□ 0.18
PDGFB-201ENST00000331163 DSG1Q02413 1049 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 ZBTB17Q13105 803 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 LONP2Q86WA8 852 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 CMTR2Q8IYT2 770 aaKnown RBP16.15■□□□□ 0.18
PDGFB-201ENST00000331163 LPCAT1Q8NF37 534 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 TEKT4Q8WW24 435 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 ZNF317Q96PQ6 595 aaPredicted RBP16.15■□□□□ 0.18
PDGFB-201ENST00000331163 ACSS2Q9NR19 701 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 CCL26Q9Y258 94 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 USP15Q9Y4E8 981 aaPredicted RBP16.15■□□□□ 0.18
PDGFB-201ENST00000331163 A0A0A0MRY4 1105 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 TTC4O95801 387 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 RHOP08100 348 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 RFC2P35250 354 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 KBTBD12Q3ZCT8 623 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 ARMC3Q5W041 872 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 MCUQ8NE86 351 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 ZNF483Q8TF39 744 aaPredicted RBP16.15■□□□□ 0.18
PDGFB-201ENST00000331163 PPP2R3CQ969Q6 453 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 SPATA13Q96N96 652 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 SLC2A13Q96QE2 648 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 WHRNQ9P202 907 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 ARID3BQ8IVW6 561 aaPredicted RBP16.15■□□□□ 0.18
PDGFB-201ENST00000331163 SPNS2Q8IVW8 549 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 SGF29Q96ES7 293 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 SMC6Q96SB8 1091 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 SMOC2Q9H3U7 446 aa16.15■□□□□ 0.18
PDGFB-201ENST00000331163 VAPBO95292 243 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 MMP13P45452 471 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 TSTA3Q13630 321 aaPredicted RBP16.14■□□□□ 0.17
PDGFB-201ENST00000331163 PTPRCAPQ14761 206 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 OASLQ15646 514 aaKnown RBP16.14■□□□□ 0.17
PDGFB-201ENST00000331163 EMC10Q5UCC4 262 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 RASSF3Q86WH2 238 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 MYEOVQ96EZ4 313 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 SERPINB12Q96P63 405 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 SMIM14Q96QK8 99 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 TGS1Q96RS0 853 aaKnown RBP16.14■□□□□ 0.17
PDGFB-201ENST00000331163 UXTQ9UBK9 157 aaPredicted RBP16.14■□□□□ 0.17
PDGFB-201ENST00000331163 TNFRSF10BO14763 440 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 CTSAP10619 480 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 GARSP41250 739 aaKnown RBP16.14■□□□□ 0.17
PDGFB-201ENST00000331163 TAOK1Q7L7X3 1001 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 TAS2R42Q7RTR8 314 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 CSNK1G1Q9HCP0 422 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 CFAP69A5D8W1 941 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 GRM2Q14416 872 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 MORF4L2Q15014 288 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 TRIP4Q15650 581 aaPredicted RBP16.14■□□□□ 0.17
PDGFB-201ENST00000331163 ATXN2LQ8WWM7 1075 aaKnown RBP16.14■□□□□ 0.17
PDGFB-201ENST00000331163 IRGQQ8WZA9 623 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 AZIN2Q96A70 460 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 MFSD3Q96ES6 412 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 ASIC4Q96FT7 647 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 PBX4Q9BYU1 374 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 MTG2Q9H4K7 406 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 CHRAC1Q9NRG0 131 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 PCMTD2Q9NV79 361 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 KLHL14Q9P2G3 628 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 TLR6Q9Y2C9 796 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 WDR87Q6ZQQ6 2873 aa16.14■□□□□ 0.17
PDGFB-201ENST00000331163 K7ERQ8 282 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 MZF1P28698 734 aaPredicted RBP16.13■□□□□ 0.17
PDGFB-201ENST00000331163 NKX3-2P78367 333 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 SLC8B1Q6J4K2 584 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 TRMT10BQ6PF06 316 aaKnown RBP16.13■□□□□ 0.17
PDGFB-201ENST00000331163 SPATA6LQ8N4H0 392 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 CDKL2Q92772 493 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 EBF3Q9H4W6 596 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDGFB-201ENST00000331163 SNX3O60493 162 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 DNAJB1P25685 340 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 PTPN3P26045 913 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 BRMS1LQ5PSV4 323 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 C6orf118Q5T5N4 469 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 OTUD1Q5VV17 481 aaPredicted RBP16.13■□□□□ 0.17
PDGFB-201ENST00000331163 GAREM2Q75VX8 874 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 ADGRD2Q7Z7M1 963 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 ART4Q93070 314 aa16.13■□□□□ 0.17
PDGFB-201ENST00000331163 NKD2Q969F2 451 aaPredicted RBP16.13■□□□□ 0.17
PDGFB-201ENST00000331163 IARS2Q9NSE4 1012 aaKnown RBP16.13■□□□□ 0.17
PDGFB-201ENST00000331163 ABCB8Q9NUT2 735 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms