RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TUBP50607 506 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 GEMP55040 296 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 USP4Q13107 963 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 THOC5Q13769 683 aaKnown RBP14.79□□□□□ -0.04
TPM3-206ENST00000330188 POU6F1Q14863 301 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 SLC39A12Q504Y0 691 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 CCDC117Q8IWD4 279 aaPredicted RBP14.79□□□□□ -0.04
TPM3-206ENST00000330188 CNTN4Q8IWV2 1026 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 ULK2Q8IYT8 1036 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 ZNF781Q8N8C0 355 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 CLPTM1LQ96KA5 538 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 THTPAQ9BU02 230 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 CXorf56Q9H5V9 222 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 OSER1Q9NX31 292 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 ANKRD6Q9Y2G4 727 aa14.79□□□□□ -0.04
TPM3-206ENST00000330188 MEI4A8MW99 385 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 CA12O43570 354 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 H2AFYO75367 372 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 HSPA4LO95757 839 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 AHSGP02765 367 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 MXRA7P84157 204 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 NRG1Q02297 640 aaPredicted RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 CCDC6Q16204 474 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 TIGD7Q6NT04 549 aaPredicted RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 ESRP1Q6NXG1 681 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 RAPH1Q70E73 1250 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 NET1Q7Z628 596 aaPredicted RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 SCN4BQ8IWT1 228 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 TMEM151AQ8N4L1 468 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 RTL3Q8N8U3 475 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 GPATCH11Q8N954 259 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 STMN2Q93045 179 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 GATA5Q9BWX5 397 aaPredicted RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 OXSMQ9NWU1 459 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 MPP6Q9NZW5 540 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 MID2Q9UJV3 735 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 TCAF1Q9Y4C2 921 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 CDY1Q9Y6F8 540 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 F8W8V4 182 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 PHGDHO43175 533 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 TBX10O75333 385 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 DDHD2O94830 711 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 APOA4P06727 396 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 SBK3P0C264 359 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 ARNTP27540 789 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 ARCN1P48444 511 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 PAPOLAP51003 745 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 PGGT1BP53609 377 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 SESN3P58005 492 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 PRKCZQ05513 592 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 SREBF2Q12772 1141 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 ITGA7Q13683 1181 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 USP10Q14694 798 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 PAXIP1Q6ZW49 1069 aaPredicted RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 ZNF280BQ86YH2 543 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 PPHLN1Q8NEY8 458 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 SREK1Q8WXA9 508 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 SERPINB11Q96P15 392 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 ACE2Q9BYF1 805 aaPredicted RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 ZCWPW1Q9H0M4 648 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 TASP1Q9H6P5 420 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 COG4Q9H9E3 785 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 MRM3Q9HC36 420 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 RBM22Q9NW64 420 aaKnown RBP eCLIP14.78□□□□□ -0.04
TPM3-206ENST00000330188 ABI2Q9NYB9 513 aaPredicted RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 CPSF2Q9P2I0 782 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 STX18Q9P2W9 335 aaKnown RBP14.78□□□□□ -0.04
TPM3-206ENST00000330188 TLK1Q9UKI8 766 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 NOD1Q9Y239 953 aa14.78□□□□□ -0.04
TPM3-206ENST00000330188 WASH4PA8MWX3 477 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 TK2O00142 265 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 VAPBO95292 243 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 SLC35E2BP0CK96 405 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 SAT1P21673 171 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 CST5P28325 142 aaPredicted RBP14.77□□□□□ -0.04
TPM3-206ENST00000330188 VHLP40337 213 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 MPP1Q00013 466 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 SLC34A1Q06495 639 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 TRMT5Q32P41 509 aaKnown RBP14.77□□□□□ -0.04
TPM3-206ENST00000330188 CMPK2Q5EBM0 449 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 PIK3R6Q5UE93 754 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 POTEHQ6S545 545 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 EPGNQ6UW88 154 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 RTN4RL1Q86UN2 441 aaPredicted RBP14.77□□□□□ -0.04
TPM3-206ENST00000330188 SLC41A1Q8IVJ1 513 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 DENND6AQ8IWF6 608 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 POU5F2Q8N7G0 328 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 RDH11Q8TC12 318 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 NRG4Q8WWG1 115 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 MRGPRX2Q96LB1 330 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 PPP1R2P1Q96PQ5 205 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 PANX3Q96QZ0 392 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 ZIC5Q96T25 663 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 LBHD1Q9BQE6 289 aaPredicted RBP14.77□□□□□ -0.04
TPM3-206ENST00000330188 ENTPD7Q9NQZ7 604 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 SLC2A6Q9UGQ3 507 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 SLC7A8Q9UHI5 535 aa14.77□□□□□ -0.04
TPM3-206ENST00000330188 CIB2O75838 187 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 ATP6V1C1P21283 382 aa14.77□□□□□ -0.05
TPM3-206ENST00000330188 AVPR1AP37288 418 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms