RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 TBC1D17Q9HA65 648 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PPCSQ9HAB8 311 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 SCUBE2Q9NQ36 999 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 KLHL8Q9P2G9 620 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PHTF1Q9UMS5 762 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 UTP11Q9Y3A2 253 aaKnown RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 MAGEB16A2A368 324 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 TMEM221A6NGB7 291 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 LRRC72A6NJI9 287 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 M0R296 226 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 TNFRSF10AO00220 468 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 LIASO43766 372 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 TSPAN3O60637 253 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 SPAG6O75602 509 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 FGGP02679 453 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 GSTM1P09488 218 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 TEAD1P28347 426 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 HOXD12P35452 270 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 LMAN1P49257 510 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 DRG2P55039 364 aaKnown RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 GSTM4Q03013 218 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CALCOCO2Q13137 446 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CAMK2GQ13555 558 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 ZNF449Q6P9G9 518 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 TPGS1Q6ZTW0 290 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 TMEM25Q86YD3 366 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 HOMEZQ8IX15 550 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 MMGT1Q8N4V1 131 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 ARFGAP1Q8N6T3 406 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 GPR161Q8N6U8 529 aaKnown RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PAF1Q8N7H5 531 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CCNYQ8ND76 341 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 OR2AP1Q8NGE2 309 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 RAPGEF5Q92565 580 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 IGSF8Q969P0 613 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 HDAC8Q9BY41 377 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 GBA3Q9H227 469 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PREBQ9HCU5 417 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 FAM153AQ9UHL3 310 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 VPS51Q9UID3 782 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 ZNF148Q9UQR1 794 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 DMTF1Q9Y222 760 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 VPS9D1Q9Y2B5 631 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 OR51B4Q9Y5P0 310 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 COL4A2P08572 1712 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 E7EVH7 732 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 URI1O94763 535 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PYGMP11217 842 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 ACADMP11310 421 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CCNB1P14635 433 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 GRIA4P48058 902 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PAPOLAP51003 745 aaKnown RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 RPS24P62847 133 aaKnown RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 OTUD4Q01804 1114 aaKnown RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 BCL2L1Q07817 233 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CBLBQ13191 982 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 KLF1Q13351 362 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CUL1Q13616 776 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PPP1R7Q15435 360 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 TEX44Q53QW1 395 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 C2CD6Q53TS8 623 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 LYPLAL1Q5VWZ2 237 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PDPK2PQ6A1A2 396 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 KIAA1161Q6NSJ0 714 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 SYT10Q6XYQ8 523 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 USP45Q70EL2 814 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 DCP2Q8IU60 420 aaKnown RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 KLHDC8BQ8IXV7 354 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CCDC105Q8IYK2 499 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PHTF2Q8N3S3 785 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 FBXL6Q8N531 539 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PQLC3Q8N755 202 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 ZNF513Q8N8E2 541 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 ATP11CQ8NB49 1132 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 MCUQ8NE86 351 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 DENND6BQ8NEG7 585 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 PJA1Q8NG27 643 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 BTBD6Q96KE9 485 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CIPCQ9C0C6 399 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 GLOD4Q9HC38 313 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 EVA1BQ9NVM1 165 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 GPATCH2LQ9NWQ4 482 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 NSMCE4AQ9NXX6 385 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 NFKBIL1Q9UBC1 381 aaPredicted RBP5.26□□□□□ -1.57
LRIT3-201ENST00000327908 ZNF212Q9UDV6 495 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 SUSD2Q9UGT4 822 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 EBF1Q9UH73 591 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 RSPH14Q9UHP6 348 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 NUDT5Q9UKK9 219 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 SHOC2Q9UQ13 582 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 CCL26Q9Y258 94 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 ATP8A1Q9Y2Q0 1164 aa5.26□□□□□ -1.57
LRIT3-201ENST00000327908 NOTCH4Q99466 2003 aa5.25□□□□□ -1.57
LRIT3-201ENST00000327908 PRR5-ARHGAP8B1AHC4 643 aa5.25□□□□□ -1.57
LRIT3-201ENST00000327908 MFSD11O43934 449 aa5.25□□□□□ -1.57
LRIT3-201ENST00000327908 GJB6O95452 261 aa5.25□□□□□ -1.57
LRIT3-201ENST00000327908 DNTTP04053 509 aa5.25□□□□□ -1.57
LRIT3-201ENST00000327908 PAMP19021 973 aa5.25□□□□□ -1.57
LRIT3-201ENST00000327908 AOC1P19801 751 aa5.25□□□□□ -1.57
LRIT3-201ENST00000327908 ITGB7P26010 798 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms