RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 KPNA1P52294 538 aaPredicted RBP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 GNA12Q03113 381 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 GRSF1Q12849 480 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 NME3Q13232 169 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 DEPDC1Q5TB30 811 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 LIPMQ5VYY2 423 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 FAM183BPQ6ZVS7 135 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 ERMP1Q7Z2K6 904 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 IGFN1Q86VF2 1251 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 ZC3H7AQ8IWR0 971 aaKnown RBP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 CBR4Q8N4T8 237 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 PACRGLQ8N7B6 248 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 STARD8Q92502 1023 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 PBXIP1Q96AQ6 731 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 PPWD1Q96BP3 646 aaKnown RBP12.98□□□□□ -0.33
CCDC60-201ENST00000327554 EFHD1Q9BUP0 239 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 IL22Q9GZX6 179 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 TMEM9Q9P0T7 183 aa12.98□□□□□ -0.33
CCDC60-201ENST00000327554 TK2O00142 265 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 C2P06681 752 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 KCNA2P16389 499 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 SPRP35270 261 aaPredicted RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ARL2P36404 184 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 GRIA3P42263 894 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ABCG1P45844 678 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 MLLT10P55197 1068 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 SP4Q02446 784 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 PTPN11Q06124 597 aaPredicted RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 MERTKQ12866 999 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 TRAF2Q12933 501 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 SLC36A3Q495N2 470 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 BSPRYQ5W0U4 402 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ZYG11AQ6WRX3 759 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 KCTD8Q6ZWB6 473 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ZBTB33Q86T24 672 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 SIX6OS1Q8N1H7 587 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 URGCPQ8TCY9 931 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 TAMM41Q96BW9 452 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 NAT9Q9BTE0 207 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ACE2Q9BYF1 805 aaPredicted RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ELOVL4Q9GZR5 314 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 VRTNQ9H8Y1 702 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ARMC1Q9NVT9 282 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 CACNA2D2Q9NY47 1150 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 GIT1Q9Y2X7 761 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 SLCO1B7G3V0H7 640 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 NFKBIAP25963 317 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ETFBP38117 255 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 TFAMQ00059 246 aaKnown RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ITGADQ13349 1161 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 PPIL2Q13356 520 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 INTS11Q5TA45 600 aaKnown RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 HEATR6Q6AI08 1181 aaKnown RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 GALNT18Q6P9A2 607 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 DNAJC14Q6Y2X3 702 aaPredicted RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 PODNQ7Z5L7 613 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 STRA8Q7Z7C7 330 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 PELI3Q8N2H9 469 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 ACVR1CQ8NER5 493 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 UBA3Q8TBC4 463 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 OLFM1Q99784 485 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 BCO2Q9BYV7 579 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 RAVER2Q9HCJ3 691 aaKnown RBP12.97□□□□□ -0.33
CCDC60-201ENST00000327554 TCAF1Q9Y4C2 921 aa12.97□□□□□ -0.33
CCDC60-201ENST00000327554 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 A0A0A0MRY4 1105 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 SDHDO14521 159 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 CLIC3O95833 236 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 HOXC6P09630 235 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 GTF2A2P52657 109 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 OXA1LQ15070 435 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 FAM98CQ17RN3 349 aaKnown RBP12.96□□□□□ -0.33
CCDC60-201ENST00000327554 SPANXN3Q5MJ09 141 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 STRIP1Q5VSL9 837 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 REP15Q6BDI9 236 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 OR6B2Q6IFH4 312 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 CANT1Q8WVQ1 401 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 ERLEC1Q96DZ1 483 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 MAELQ96JY0 434 aaKnown RBP12.96□□□□□ -0.33
CCDC60-201ENST00000327554 PRMT6Q96LA8 375 aaPredicted RBP12.96□□□□□ -0.33
CCDC60-201ENST00000327554 SPATA13Q96N96 652 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 EIF2B3Q9NR50 452 aaKnown RBP12.96□□□□□ -0.33
CCDC60-201ENST00000327554 ATAD3AQ9NVI7 634 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 SUN2Q9UH99 717 aa12.96□□□□□ -0.33
CCDC60-201ENST00000327554 ZNF638Q14966 1978 aaKnown RBP12.96□□□□□ -0.33
CCDC60-201ENST00000327554 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.96□□□□□ -0.34
CCDC60-201ENST00000327554 ZNF487B1APH4 448 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 TMEM233B4DJY2 109 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 DPYSL4O14531 572 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 NRP1O14786 923 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 MDM4O15151 490 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 POLBP06746 335 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 HDCP19113 662 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 TFE3P19532 575 aaPredicted RBP12.96□□□□□ -0.34
CCDC60-201ENST00000327554 ATP6V1B2P21281 511 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 MATN1P21941 496 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 JAK1P23458 1154 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 GNL1P36915 607 aaPredicted RBP12.96□□□□□ -0.34
CCDC60-201ENST00000327554 NAGLUP54802 743 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms