RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 TTC27Q6P3X3 843 aa8□□□□□ -1.13
CIITA-201ENST00000324288 CYP20A1Q6UW02 462 aa8□□□□□ -1.13
CIITA-201ENST00000324288 KBTBD8Q8NFY9 601 aa8□□□□□ -1.13
CIITA-201ENST00000324288 S100ZQ8WXG8 99 aa8□□□□□ -1.13
CIITA-201ENST00000324288 PDGFDQ9GZP0 370 aaPredicted RBP8□□□□□ -1.13
CIITA-201ENST00000324288 ALG9Q9H6U8 611 aa8□□□□□ -1.13
CIITA-201ENST00000324288 ING3Q9NXR8 418 aa8□□□□□ -1.13
CIITA-201ENST00000324288 PTGFRNQ9P2B2 879 aa8□□□□□ -1.13
CIITA-201ENST00000324288 FBXL21Q9UKT6 434 aa8□□□□□ -1.13
CIITA-201ENST00000324288 UBE2QL1A1L167 161 aa8□□□□□ -1.13
CIITA-201ENST00000324288 MED24O75448 989 aa8□□□□□ -1.13
CIITA-201ENST00000324288 ITGB1P05556 798 aa8□□□□□ -1.13
CIITA-201ENST00000324288 PTPN5P54829 565 aa8□□□□□ -1.13
CIITA-201ENST00000324288 GCNT7Q6ZNI0 430 aa8□□□□□ -1.13
CIITA-201ENST00000324288 TBL1YQ9BQ87 522 aa8□□□□□ -1.13
CIITA-201ENST00000324288 DRG1Q9Y295 367 aaKnown RBP8□□□□□ -1.13
CIITA-201ENST00000324288 FAM237BA0A1B0GVD1 139 aa8□□□□□ -1.13
CIITA-201ENST00000324288 DPPA5A6NC42 116 aa8□□□□□ -1.13
CIITA-201ENST00000324288 EPN2O95208 641 aa8□□□□□ -1.13
CIITA-201ENST00000324288 AMPD1P23109 780 aa8□□□□□ -1.13
CIITA-201ENST00000324288 S100A1P23297 94 aa8□□□□□ -1.13
CIITA-201ENST00000324288 BOLA3Q53S33 107 aa8□□□□□ -1.13
CIITA-201ENST00000324288 MZT2AQ6P582 158 aa8□□□□□ -1.13
CIITA-201ENST00000324288 KCNMB4Q86W47 210 aa8□□□□□ -1.13
CIITA-201ENST00000324288 PJA1Q8NG27 643 aa8□□□□□ -1.13
CIITA-201ENST00000324288 ING5Q8WYH8 240 aa8□□□□□ -1.13
CIITA-201ENST00000324288 TP53INP1Q96A56 240 aa8□□□□□ -1.13
CIITA-201ENST00000324288 S100A13Q99584 98 aa8□□□□□ -1.13
CIITA-201ENST00000324288 TLR8Q9NR97 1041 aaKnown RBP8□□□□□ -1.13
CIITA-201ENST00000324288 PNPLA3Q9NST1 481 aa8□□□□□ -1.13
CIITA-201ENST00000324288 ADPRHL2Q9NX46 363 aa8□□□□□ -1.13
CIITA-201ENST00000324288 TBC1D24Q9ULP9 559 aa8□□□□□ -1.13
CIITA-201ENST00000324288 TPP1O14773 563 aa8□□□□□ -1.13
CIITA-201ENST00000324288 CCR1P32246 355 aa8□□□□□ -1.13
CIITA-201ENST00000324288 S100A3P33764 101 aa8□□□□□ -1.13
CIITA-201ENST00000324288 HPCAL1P37235 193 aa8□□□□□ -1.13
CIITA-201ENST00000324288 CDC42EP1Q00587 391 aa8□□□□□ -1.13
CIITA-201ENST00000324288 MSLNQ13421 630 aaPredicted RBP8□□□□□ -1.13
CIITA-201ENST00000324288 MFSD7Q6UXD7 560 aa8□□□□□ -1.13
CIITA-201ENST00000324288 LINC00116Q8NCU8 138 aa8□□□□□ -1.13
CIITA-201ENST00000324288 OR8H1Q8NGG4 311 aa8□□□□□ -1.13
CIITA-201ENST00000324288 CDH9Q9ULB4 789 aa8□□□□□ -1.13
CIITA-201ENST00000324288 ITSN1Q15811 1721 aa8□□□□□ -1.13
CIITA-201ENST00000324288 DDX3XO00571 662 aaKnown RBP eCLIP8□□□□□ -1.13
CIITA-201ENST00000324288 TCEA1P23193 301 aaKnown RBP8□□□□□ -1.13
CIITA-201ENST00000324288 RAB43Q86YS6 212 aa8□□□□□ -1.13
CIITA-201ENST00000324288 ACER1Q8TDN7 264 aa8□□□□□ -1.13
CIITA-201ENST00000324288 KCNS3Q9BQ31 491 aa8□□□□□ -1.13
CIITA-201ENST00000324288 TRDMT1O14717 391 aaKnown RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 USP17L7P0C7H9 530 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 HNF4AP41235 474 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 NT5C2P49902 561 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 SRSF11Q05519 484 aaKnown RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 ABRAXAS1Q6UWZ7 409 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 C16orf86Q6ZW13 317 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 GLT6D1Q7Z4J2 308 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CDK20Q8IZL9 346 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 EZH1Q92800 747 aaPredicted RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 REXO5Q96IC2 774 aaKnown RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 A8MV72 311 aaPredicted RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 CBFA2T3O75081 653 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 TUBP50607 506 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 USP4Q13107 963 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PEX6Q13608 980 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PAPD7Q5XG87 772 aaKnown RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 ZNF613Q6PF04 617 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 GPR156Q8NFN8 814 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ERGIC2Q96RQ1 377 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 MARCH7Q9H992 704 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 MAT2BQ9NZL9 334 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 URODP06132 367 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CSF1RP07333 972 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 SLC5A9Q2M3M2 681 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 IL27RAQ6UWB1 636 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 GPSM1Q86YR5 675 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 SAMD3Q8N6K7 520 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 RELTQ969Z4 430 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 MED28Q9H204 178 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 EPB41L4BQ9H329 900 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CISHQ9NSE2 258 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 NCKIPSDQ9NZQ3 722 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 BTN3A1O00481 513 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 OR6A2O95222 327 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PGK1P00558 417 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ANTXR2P58335 489 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PTENP60484 403 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 PLD1Q13393 1074 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CBFBQ13951 182 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 BRINP3Q76B58 766 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 OFCC1Q8IZS5 231 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 DNAJB14Q8TBM8 379 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 RCN3Q96D15 328 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 CLPTM1LQ96KA5 538 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ACSS2Q9NR19 701 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 VTI1BQ9UEU0 232 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ZNF221Q9UK13 617 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ALADP13716 330 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 BTN3A2P78410 334 aa7.99□□□□□ -1.13
CIITA-201ENST00000324288 ZCCHC8Q6NZY4 707 aaKnown RBP7.99□□□□□ -1.13
CIITA-201ENST00000324288 SLC30A10Q6XR72 485 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms