RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CTC1Q2NKJ3 1217 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 ERFEQ4G0M1 354 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 CDC73Q6P1J9 531 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 LEMD2Q8NC56 503 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 MECRQ9BV79 373 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 NT5C1AQ9BXI3 368 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 RIBC2Q9H4K1 309 aa7.15□□□□□ -1.26
SMC1A-201ENST00000322213 GNB5O14775 395 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 ZMPSTE24O75844 475 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 GDF11O95390 407 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 MAPTP10636 758 aaKnown RBP7.15□□□□□ -1.27
SMC1A-201ENST00000322213 CCNCP24863 283 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 PUDPQ08623 228 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 STXBP2Q15833 593 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 SDE2Q6IQ49 451 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 PMF1Q6P1K2 205 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 INTS10Q9NVR2 710 aaKnown RBP7.15□□□□□ -1.27
SMC1A-201ENST00000322213 GPRC5DQ9NZD1 345 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 PLCL2Q9UPR0 1127 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 SNX8Q9Y5X2 465 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 TFECO14948 347 aaPredicted RBP7.15□□□□□ -1.27
SMC1A-201ENST00000322213 CRYZL1O95825 349 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 RFX5P48382 616 aaPredicted RBP7.15□□□□□ -1.27
SMC1A-201ENST00000322213 GMFBP60983 142 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF720Q7Z2F6 126 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 DENND6AQ8IWF6 608 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 SP140LQ9H930 580 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 MLXQ9UH92 298 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 RPS6KA6Q9UK32 745 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 AHCTF1Q8WYP5 2266 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 BOLA2-SMG1P6H3BVE0 249 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 UGT2B11O75310 529 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 SUPT7LO94864 414 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 IFNA7P01567 189 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 ITGAXP20702 1163 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 PTPN7P35236 360 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 CHKAP35790 457 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 CEBPAP49715 358 aaPredicted RBP7.15□□□□□ -1.27
SMC1A-201ENST00000322213 MAMLD1Q13495 774 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 XKRXQ6PP77 449 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF540Q8NDQ6 660 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 ACSF2Q96CM8 615 aaPredicted RBP7.15□□□□□ -1.27
SMC1A-201ENST00000322213 ERVK-5Q9HDB9 667 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 DNAJC5BQ9UF47 199 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 MKLN1Q9UL63 735 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 CLEC11AQ9Y240 323 aa7.15□□□□□ -1.27
SMC1A-201ENST00000322213 ROBO1Q9Y6N7 1651 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CRTAMO95727 393 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 IFNA14P01570 189 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 BCAP31P51572 246 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 GCNT1Q02742 428 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CYP24A1Q07973 514 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 TRIM28Q13263 835 aaKnown RBP7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ZSWIM7Q19AV6 140 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 USP43Q70EL4 1123 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 FAM71AQ8IYT1 594 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 XPNPEP3Q9NQH7 507 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CCNL1Q9UK58 526 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-201ENST00000322213 GSTK1Q9Y2Q3 226 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 DOPEY2Q9Y3R5 2298 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 GRIA4P48058 902 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 HGSNATQ68CP4 663 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CYP4Z1Q86W10 505 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 RASAL3Q86YV0 1011 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 IL22Q9GZX6 179 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CATSPERBQ9H7T0 1116 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 LIMD1Q9UGP4 676 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 POLIQ9UNA4 740 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 MYPNQ86TC9 1320 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 SNAP23O00161 211 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 GNAZP19086 355 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 NDUFAF6Q330K2 333 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CASP12Q6UXS9 341 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 UTP15Q8TED0 518 aaKnown RBP7.14□□□□□ -1.27
SMC1A-201ENST00000322213 FAR1Q8WVX9 515 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ROGDIQ9GZN7 287 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CHST12Q9NRB3 414 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ZNF224Q9NZL3 707 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 TMCC3Q9ULS5 477 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 VPS4AQ9UN37 437 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PKP3Q9Y446 797 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 HACD1B0YJ81 288 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 HAT1O14929 419 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 DDX3YO15523 660 aaKnown RBP7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PLOD3O60568 738 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 TMCC2O75069 709 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 SNAPC5O75971 98 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 HNF4AP41235 474 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ACOT2P49753 483 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 CCDC157Q569K6 752 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 STARD8Q92502 1023 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 TUBA1CQ9BQE3 449 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ISCA1Q9BUE6 129 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PDCD10Q9BUL8 212 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 ADI1Q9BV57 179 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 NDFIP2Q9NV92 336 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 GABBR1Q9UBS5 961 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 PTBP2Q9UKA9 531 aaKnown RBP7.14□□□□□ -1.27
SMC1A-201ENST00000322213 DUSP12Q9UNI6 340 aa7.14□□□□□ -1.27
SMC1A-201ENST00000322213 BCKDKO14874 412 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms