RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 KATNAL1Q9BW62 490 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 WDCPQ9H6R7 721 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 XAB2Q9HCS7 855 aaKnown RBP15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 DTNAQ9Y4J8 743 aa15.83■□□□□ 0.12
SHROOM1-201ENST00000319854 DFFAO00273 331 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 ZBTB24O43167 697 aaPredicted RBP15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 MSI1O43347 362 aaKnown RBP15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 SUPT3HO75486 399 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 PRKCHP24723 683 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 DAOAP59103 153 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 SEMA5AQ13591 1074 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 PDK1Q15118 436 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 CERCAMQ5T4B2 595 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 ATG16L1Q676U5 607 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 KLHL35Q6PF15 583 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 MARVELD2Q8N4S9 558 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 MYLPFQ96A32 169 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 AGAP2Q99490 1192 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 UNKQ9C0B0 810 aaKnown RBP15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 LIN28AQ9H9Z2 209 aaKnown RBP15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 ARHGEF38Q9NXL2 777 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 GABRQQ9UN88 632 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 CASQ2O14958 399 aaPredicted RBP15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 JCHAINP01591 159 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 LTFP02788 710 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 CYLC2Q14093 348 aaPredicted RBP15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 TNS4Q8IZW8 715 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 PRPF18Q99633 342 aaKnown RBP15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 DNAI2Q9GZS0 605 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 CAB39LQ9H9S4 337 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 TMLHEQ9NVH6 421 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 OR12D3Q9UGF7 316 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 NOD1Q9Y239 953 aa15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 SF3B1O75533 1304 aaKnown RBP eCLIP15.82■□□□□ 0.12
SHROOM1-201ENST00000319854 MGEA5O60502 916 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 AKR1A1P14550 325 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 VARSP26640 1264 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 XIAPP98170 497 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 SULT2A1Q06520 285 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 OGFRL1Q5TC84 451 aaPredicted RBP15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 TRIM67Q6ZTA4 783 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 KBTBD6Q86V97 674 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 MCUQ8NE86 351 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 MFSD3Q96ES6 412 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 BOLA2-SMG1P6H3BVE0 249 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 ITGAXP20702 1163 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 PGFP49763 221 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 CBX3Q13185 183 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 DLG2Q15700 870 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 N4BP2L1Q5TBK1 243 aaPredicted RBP15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 VWA5B1Q5TIE3 1220 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 MAVSQ7Z434 540 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 BTBD9Q96Q07 612 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 FERMT1Q9BQL6 677 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 COLEC11Q9BWP8 271 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 XPNPEP3Q9NQH7 507 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 SFMBT1Q9UHJ3 866 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 PADI3Q9ULW8 664 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 ZSWIM8A7E2V4 1837 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 SHROOM3Q8TF72 1996 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 TRDMT1O14717 391 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 DENRO43583 198 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 SIN3BO75182 1162 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 CRTAMO95727 393 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 COPAP53621 1224 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 SFSWAPQ12872 951 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 HSP90AA5PQ58FG0 334 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 XKR4Q5GH76 650 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 ARHGAP36Q6ZRI8 547 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 FRMD7Q6ZUT3 714 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 SCN4BQ8IWT1 228 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 PIP4K2CQ8TBX8 421 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 ARNTL2Q8WYA1 636 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 FCRL3Q96P31 734 aaPredicted RBP15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 ATXN3LQ9H3M9 355 aa15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 WDR6Q9NNW5 1121 aaKnown RBP15.81■□□□□ 0.12
SHROOM1-201ENST00000319854 FAM159BA6NKW6 160 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 ALDOAP04075 364 aaKnown RBP15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 TPSB2P20231 275 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 TYK2P29597 1187 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 ZBTB17Q13105 803 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 STX3Q13277 289 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 TPSAB1Q15661 275 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 TAF2Q6P1X5 1199 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 OTOP3Q7RTS5 596 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 ZNF554Q86TJ5 538 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 GPR152Q8TDT2 470 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 ACTRT2Q8TDY3 377 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 DIS3LQ8TF46 1054 aaKnown RBP15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 LZICQ8WZA0 190 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 APBA2Q99767 749 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 MRPL1Q9BYD6 325 aaKnown RBP15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 TRMT13Q9NUP7 481 aaKnown RBP15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 DNAJC16Q9Y2G8 782 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 TRPV2Q9Y5S1 764 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 AK5Q9Y6K8 562 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 GABRDO14764 452 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 LRIG2O94898 1065 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 BPGMP07738 259 aa15.8■□□□□ 0.12
SHROOM1-201ENST00000319854 PTPN3P26045 913 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms