RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 TBC1D3HP0C7X1 549 aa29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 ACVRL1P37023 503 aa29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 PARP15Q460N3 678 aa29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 TBC1D3GQ6DHY5 549 aa29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 TBC1D3CQ6IPX1 549 aa29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 TBC1D3Q8IZP1 549 aaPredicted RBP29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 ISG20Q96AZ6 181 aaKnown RBP29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 PPP1R16AQ96I34 528 aa29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 NDFIP2Q9NV92 336 aa29.77■■■□□ 2.36
SYNGR1-202ENST00000318801 KPNA3O00505 521 aaPredicted RBP29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 KDELR3O43731 214 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 OPHN1O60890 802 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 MIPP30301 263 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 PCK1P35558 622 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 IL27RAQ6UWB1 636 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 VSTM4Q8IW00 320 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 SKA1Q96BD8 255 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 THAP2Q9H0W7 228 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 TNKS2Q9H2K2 1166 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 OSGEPQ9NPF4 335 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 ARHGAP20Q9P2F6 1191 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 IL36AQ9UHA7 158 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 IP6K2Q9UHH9 426 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 SARDHQ9UL12 918 aa29.76■■■□□ 2.35
SYNGR1-202ENST00000318801 DNAH14Q0VDD8 3507 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 WASH4PA8MWX3 477 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 EEF2KO00418 725 aaKnown RBP29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 TM4SF5O14894 197 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 KCNA4P22459 653 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 EIF4A3P38919 411 aaKnown RBP29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 CCR5P51681 352 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 ADPRHP54922 357 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 ARF5P84085 180 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 SEMA3BQ13214 749 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 BOLA3Q53S33 107 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 CARD16Q5EG05 197 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 PPM1JQ5JR12 505 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 CASKIN2Q8WXE0 1202 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 DNAJC7Q99615 494 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 NEU3Q9UQ49 428 aa29.75■■■□□ 2.35
SYNGR1-202ENST00000318801 SPTBN2O15020 2390 aa29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 ADAMTS9Q9P2N4 1935 aa29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 BUB1O43683 1085 aa29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 ADAT2Q7Z6V5 191 aaKnown RBP29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 PLPP6Q8IY26 295 aa29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 UMODL1-AS1Q8N2C9 162 aa29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 MINDY1Q8N5J2 469 aa29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 NUP85Q9BW27 656 aa29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 TRIM7Q9C029 511 aa29.74■■■□□ 2.35
SYNGR1-202ENST00000318801 CHD5Q8TDI0 1954 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 MYO1FO00160 1098 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 LRCH4O75427 683 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 CYP1A2P05177 515 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 DRD3P35462 400 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 ZNF252P-AS1Q0IIN9 211 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 CNTN1Q12860 1018 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 POM121L1PQ3SYA9 428 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 PPP6R3Q5H9R7 873 aaPredicted RBP29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 DPY19L3Q6ZPD9 716 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 RYBPQ8N488 228 aaPredicted RBP29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 HEPHQ9BQS7 1158 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 SNRNP25Q9BV90 132 aaKnown RBP29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 TRIM5Q9C035 493 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 ZWILCHQ9H900 591 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 GPATCH2LQ9NWQ4 482 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 ANAPC7Q9UJX3 599 aa29.73■■■□□ 2.35
SYNGR1-202ENST00000318801 AKR1B10O60218 316 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 NUDT1P36639 197 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 NDST2P52849 883 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 SNRPD1P62314 119 aaKnown RBP29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 SLC18A3Q16572 532 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 ARSIQ5FYB1 569 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 PRPF39Q86UA1 669 aaKnown RBP29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 CNGA4Q8IV77 575 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 ARFGAP1Q8N6T3 406 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 C1orf216Q8TAB5 229 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 CTNNBL1Q8WYA6 563 aaPredicted RBP29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 SLC32A1Q9H598 525 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 FSCN3Q9NQT6 498 aa29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 FCF1Q9Y324 198 aaKnown RBP29.72■■■□□ 2.35
SYNGR1-202ENST00000318801 A0A1W2PPC4 97 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 SSU72P8A0A1W2PR75 194 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 RASA4BC9J798 803 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 RASA4O43374 803 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 CER1O95813 267 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 IGHV4-34P06331 123 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 HCAR3P49019 387 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 RACK1P63244 317 aaKnown RBP29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 GRIK2Q13002 908 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 SLC14A1Q13336 389 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 GRIN3AQ8TCU5 1115 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 LRIG1Q96JA1 1093 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 CCDC42Q96M95 316 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 TM9SF3Q9HD45 589 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 LCMT1Q9UIC8 334 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 ASCC3Q8N3C0 2202 aaKnown RBP29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 KNL1Q8NG31 2342 aa29.71■■■□□ 2.35
SYNGR1-202ENST00000318801 PLRG1O43660 514 aaKnown RBP29.7■■■□□ 2.35
SYNGR1-202ENST00000318801 ARL4AP40617 200 aa29.7■■■□□ 2.35
SYNGR1-202ENST00000318801 GRIA4P48058 902 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms