RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 MAP3K14Q99558 947 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ATXN3LQ9H3M9 355 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 RAD54BQ9Y620 910 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SAGE2PA6NJ88 616 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 STMND1H3BQB6 276 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 M0R036 132 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 CASKO14936 926 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SMAD9O15198 467 aaKnown RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 TBX1O43435 398 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 OSGEPL1Q9H4B0 414 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 GIN1Q9NXP7 522 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ABCG2Q9UNQ0 655 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 A8MV72 311 aaPredicted RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 SNX3O60493 162 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 PEX2P28328 305 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 RNF43Q68DV7 783 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 KBTBD7Q8WVZ9 684 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 HSPBAP1Q96EW2 488 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 NMRAL1Q9HBL8 299 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 AGPAT3Q9NRZ7 376 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ETNK2Q9NVF9 386 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 SSR3Q9UNL2 185 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 FUT4P22083 530 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 C7orf57Q8NEG2 295 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 ADAM32Q8TC27 787 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 PGK1P00558 417 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 MCCD1P59942 119 aaPredicted RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 ZNF267Q14586 743 aaPredicted RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 FAM182BQ5T319 152 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 KLHDC10Q6PID8 442 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 PHF10Q8WUB8 498 aaKnown RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 PRKAG2Q9UGJ0 569 aa8.84□□□□□ -0.99
USF3-201ENST00000316407 OAS3Q9Y6K5 1087 aaKnown RBP8.84□□□□□ -0.99
USF3-201ENST00000316407 ZFYVE16Q7Z3T8 1539 aa8.84□□□□□ -1
USF3-201ENST00000316407 AATKQ6ZMQ8 1374 aa8.84□□□□□ -1
USF3-201ENST00000316407 A8MX80 341 aa8.84□□□□□ -1
USF3-201ENST00000316407 CYBBP04839 570 aa8.84□□□□□ -1
USF3-201ENST00000316407 PRLRP16471 622 aa8.84□□□□□ -1
USF3-201ENST00000316407 NFKB1P19838 968 aa8.84□□□□□ -1
USF3-201ENST00000316407 RCAN1P53805 252 aa8.84□□□□□ -1
USF3-201ENST00000316407 MFSD7Q6UXD7 560 aa8.84□□□□□ -1
USF3-201ENST00000316407 ZSCAN5AQ9BUG6 496 aa8.84□□□□□ -1
USF3-201ENST00000316407 I3L521 148 aa8.83□□□□□ -1
USF3-201ENST00000316407 TADA2AO75478 443 aa8.83□□□□□ -1
USF3-201ENST00000316407 RBMXL2O75526 392 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 CALCAP01258 141 aa8.83□□□□□ -1
USF3-201ENST00000316407 ELOA2Q8IYF1 753 aaPredicted RBP8.83□□□□□ -1
USF3-201ENST00000316407 PGBD3Q8N328 593 aa8.83□□□□□ -1
USF3-201ENST00000316407 OR2L5Q8NG80 312 aa8.83□□□□□ -1
USF3-201ENST00000316407 CKAP2Q8WWK9 683 aa8.83□□□□□ -1
USF3-201ENST00000316407 EIF3KQ9UBQ5 218 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 SPAG17Q6Q759 2223 aa8.83□□□□□ -1
USF3-201ENST00000316407 GLI2P10070 1586 aa8.83□□□□□ -1
USF3-201ENST00000316407 DCDC2CA8MYV0 355 aa8.83□□□□□ -1
USF3-201ENST00000316407 H7C0S8 307 aa8.83□□□□□ -1
USF3-201ENST00000316407 NARSO43776 548 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 NAB1Q13506 487 aa8.83□□□□□ -1
USF3-201ENST00000316407 SUZ12Q15022 739 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 TAF13Q15543 124 aa8.83□□□□□ -1
USF3-201ENST00000316407 C3orf67Q6ZVT6 689 aa8.83□□□□□ -1
USF3-201ENST00000316407 AHSA2Q719I0 299 aa8.83□□□□□ -1
USF3-201ENST00000316407 ZNF366Q8N895 744 aa8.83□□□□□ -1
USF3-201ENST00000316407 TTC29Q8NA56 475 aaPredicted RBP8.83□□□□□ -1
USF3-201ENST00000316407 DENND6BQ8NEG7 585 aa8.83□□□□□ -1
USF3-201ENST00000316407 TP53INP1Q96A56 240 aa8.83□□□□□ -1
USF3-201ENST00000316407 BTBD9Q96Q07 612 aa8.83□□□□□ -1
USF3-201ENST00000316407 FAM50BQ9Y247 325 aa8.83□□□□□ -1
USF3-201ENST00000316407 MED14O60244 1454 aa8.83□□□□□ -1
USF3-201ENST00000316407 MTHFRP42898 656 aa8.83□□□□□ -1
USF3-201ENST00000316407 RFWD3Q6PCD5 774 aa8.83□□□□□ -1
USF3-201ENST00000316407 SLC41A1Q8IVJ1 513 aa8.83□□□□□ -1
USF3-201ENST00000316407 ACTRT2Q8TDY3 377 aa8.83□□□□□ -1
USF3-201ENST00000316407 PCDH9Q9HC56 1237 aa8.83□□□□□ -1
USF3-201ENST00000316407 EDARQ9UNE0 448 aa8.83□□□□□ -1
USF3-201ENST00000316407 RPH3AQ9Y2J0 694 aaPredicted RBP8.83□□□□□ -1
USF3-201ENST00000316407 AVILO75366 819 aa8.83□□□□□ -1
USF3-201ENST00000316407 FDPSP14324 419 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 TNK2Q07912 1038 aa8.83□□□□□ -1
USF3-201ENST00000316407 FCRL4Q96PJ5 515 aa8.83□□□□□ -1
USF3-201ENST00000316407 AAR2Q9Y312 384 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 CLPXO76031 633 aa8.83□□□□□ -1
USF3-201ENST00000316407 RARAP10276 462 aa8.83□□□□□ -1
USF3-201ENST00000316407 COX7A2P14406 83 aa8.83□□□□□ -1
USF3-201ENST00000316407 MPP2Q14168 576 aa8.83□□□□□ -1
USF3-201ENST00000316407 PPP1R26Q5T8A7 1209 aaPredicted RBP8.83□□□□□ -1
USF3-201ENST00000316407 TULP2O00295 520 aa8.83□□□□□ -1
USF3-201ENST00000316407 JCHAINP01591 159 aa8.83□□□□□ -1
USF3-201ENST00000316407 MYL9P24844 172 aa8.83□□□□□ -1
USF3-201ENST00000316407 CLCN2P51788 898 aa8.83□□□□□ -1
USF3-201ENST00000316407 GRTP1Q5TC63 336 aa8.83□□□□□ -1
USF3-201ENST00000316407 DPY19L2Q6NUT2 758 aa8.83□□□□□ -1
USF3-201ENST00000316407 MAP3K20Q9NYL2 800 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 ANKRD6Q9Y2G4 727 aa8.83□□□□□ -1
USF3-201ENST00000316407 CPSF1Q10570 1443 aaKnown RBP8.83□□□□□ -1
USF3-201ENST00000316407 CNTNAP5Q8WYK1 1306 aa8.83□□□□□ -1
USF3-201ENST00000316407 IL18RAPO95256 599 aa8.83□□□□□ -1
USF3-201ENST00000316407 APBA3O96018 575 aa8.83□□□□□ -1
USF3-201ENST00000316407 ST8SIA6P61647 398 aa8.83□□□□□ -1
USF3-201ENST00000316407 LCN1P1Q5VSP4 162 aa8.83□□□□□ -1
USF3-201ENST00000316407 RASAL3Q86YV0 1011 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms