RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 SIK3Q9Y2K2 1263 aa12.96□□□□□ -0.33
CKS2-201ENST00000314355 SLCO1B1Q9Y6L6 691 aa12.96□□□□□ -0.33
CKS2-201ENST00000314355 ZSCAN5CA6NGD5 496 aaPredicted RBP12.95□□□□□ -0.34
CKS2-201ENST00000314355 C2CD4BA6NLJ0 364 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 K7ERQ8 282 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 PLK4O00444 970 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 NEMP1O14524 444 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 SLC31A1O15431 190 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 RAMP2O60895 175 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 PLEKP08567 350 aaPredicted RBP12.95□□□□□ -0.34
CKS2-201ENST00000314355 CHRNB2P17787 502 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 SERPINH1P50454 418 aaKnown RBP12.95□□□□□ -0.34
CKS2-201ENST00000314355 NEK3P51956 506 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 AIF1P55008 147 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 NXPH1P58417 271 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 NRG1Q02297 640 aaPredicted RBP12.95□□□□□ -0.34
CKS2-201ENST00000314355 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
CKS2-201ENST00000314355 SGCGQ13326 291 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 AGBL4Q5VU57 503 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 WDR59Q6PJI9 974 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 SLCO6A1Q86UG4 719 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 ZSCAN30Q86W11 494 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 PHF13Q86YI8 300 aaPredicted RBP12.95□□□□□ -0.34
CKS2-201ENST00000314355 ZNF683Q8IZ20 524 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 GRIN3AQ8TCU5 1115 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 GATA6Q92908 595 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 ARHGEF26Q96DR7 871 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 LRIG1Q96JA1 1093 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 EPAS1Q99814 870 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 ORAI3Q9BRQ5 295 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 HDAC8Q9BY41 377 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 TNKS2Q9H2K2 1166 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 EBF2Q9HAK2 575 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 IPO11Q9UI26 975 aaKnown RBP12.95□□□□□ -0.34
CKS2-201ENST00000314355 DNAI1Q9UI46 699 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 CACNA1BQ00975 2339 aa12.95□□□□□ -0.34
CKS2-201ENST00000314355 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 A0A1W2PR77 199 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 SMAD6O43541 496 aaKnown RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 LEFTY1O75610 366 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 WNT1P04628 370 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 C1SP09871 688 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 ATXN1LP0C7T5 689 aaKnown RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 HNRNPA2B1P22626 353 aaKnown RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 EPHB2P29323 1055 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 L1CAMP32004 1257 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 RFC1P35251 1148 aaPredicted RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 HNF1BP35680 557 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 RXRGP48443 463 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 GSCP56915 257 aaPredicted RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 PPP2CBP62714 309 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 RPS21P63220 83 aaKnown RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 PPP2CAP67775 309 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 TYRO3Q06418 890 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 KCNT1Q5JUK3 1230 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 ACAD10Q6JQN1 1059 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 DPY19L3Q6ZPD9 716 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 TMPRSS7Q7RTY8 843 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 BNIPLQ7Z465 357 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 HORMAD1Q86X24 394 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 GATAD2AQ86YP4 633 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 DCP2Q8IU60 420 aaKnown RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 AOPEPQ8N6M6 819 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 JOSD2Q8TAC2 188 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 BAHD1Q8TBE0 780 aaPredicted RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 CASKIN2Q8WXE0 1202 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 NTAN1Q96AB6 310 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 FAM131CQ96AQ9 280 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 ISG20Q96AZ6 181 aaKnown RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 VCPIP1Q96JH7 1222 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 CNDP2Q96KP4 475 aaKnown RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 CCDC86Q9H6F5 360 aaKnown RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 ZDHHC6Q9H6R6 413 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 EVA1BQ9NVM1 165 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 TMEM248Q9NWD8 314 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 ARHGAP20Q9P2F6 1191 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 MYO6Q9UM54 1294 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 PCDHGA1Q9Y5H4 931 aa12.94□□□□□ -0.34
CKS2-201ENST00000314355 MUC22E2RYF6 1773 aaPredicted RBP12.94□□□□□ -0.34
CKS2-201ENST00000314355 KNL1Q8NG31 2342 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 ENC1O14682 589 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 EPHB6O15197 1021 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 DAPK3O43293 454 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 BUB1O43683 1085 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 CREB3O43889 395 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 RNF8O76064 485 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 LRIG2O94898 1065 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 POP4O95707 220 aaKnown RBP12.93□□□□□ -0.34
CKS2-201ENST00000314355 THEGLP0DJG4 465 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 ALPPL2P10696 532 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 JUPP14923 745 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 XPAP23025 273 aaPredicted RBP12.93□□□□□ -0.34
CKS2-201ENST00000314355 ZNF143P52747 638 aaPredicted RBP12.93□□□□□ -0.34
CKS2-201ENST00000314355 ANO6Q4KMQ2 910 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 KIAA1161Q6NSJ0 714 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 CCNI2Q6ZMN8 369 aaPredicted RBP12.93□□□□□ -0.34
CKS2-201ENST00000314355 EID2Q8N6I1 236 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 SAP25Q8TEE9 199 aa12.93□□□□□ -0.34
CKS2-201ENST00000314355 CENPIQ92674 756 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms