RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 VPS45Q9NRW7 570 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 HBS1LQ9Y450 684 aaKnown RBP13.88□□□□□ -0.19
DDX54-202ENST00000314045 PCDHB9Q9Y5E1 797 aa13.88□□□□□ -0.19
DDX54-202ENST00000314045 C8AP07357 584 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 RPSAP08865 295 aaKnown RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 ABCE1P61221 599 aaKnown RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 CLDN10P78369 228 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 CERCAMQ5T4B2 595 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 AGGF1Q8N302 714 aaeCLIP13.87□□□□□ -0.19
DDX54-202ENST00000314045 ARL14EPQ8N8R7 260 aaPredicted RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 SMG7Q92540 1137 aaKnown RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 FBXO5Q9UKT4 447 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 C5orf60A6NFR6 353 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 CDH5P33151 784 aaPredicted RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 PARP15Q460N3 678 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 CCDC153Q494R4 210 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 ANKRD22Q5VYY1 191 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 KREMEN2Q8NCW0 462 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 NTAN1Q96AB6 310 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 TUBGCP3Q96CW5 907 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 NSL1Q96IY1 281 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 TRIM15Q9C019 465 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 NMRAL1Q9HBL8 299 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 MRGBPQ9NV56 204 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 STK39Q9UEW8 545 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 MAP3K7O43318 606 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 H2AFYO75367 372 aaKnown RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 SERPINE1P05121 402 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 SERPIND1P05546 499 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 HOXB8P17481 243 aaPredicted RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 TPSB2P20231 275 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 RPA3P35244 121 aaPredicted RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 CAPRIN1Q14444 709 aaKnown RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 TPSAB1Q15661 275 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 PPP1R15BQ5SWA1 713 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 RNASEH2BQ5TBB1 312 aaKnown RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 EXOC3L1Q86VI1 746 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 SLC35B2Q8TB61 432 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 AUTS2Q8WXX7 1259 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 THTPAQ9BU02 230 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 ATP13A3Q9H7F0 1226 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 CERS4Q9HA82 394 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 STOML1Q9UBI4 398 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 FMO4P31512 558 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 GATMP50440 423 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 DNAL1Q4LDG9 190 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 ANKRD20A4Q4UJ75 823 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 SEL1L3Q68CR1 1132 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 DSG4Q86SJ6 1040 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 ZNF567Q8N184 647 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 SLC26A7Q8TE54 656 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 ZNF75CPQ92670 426 aaPredicted RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 N4BP2L2Q92802 583 aaPredicted RBP13.87□□□□□ -0.19
DDX54-202ENST00000314045 CATSPERZQ9NTU4 200 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 MIOSQ9NXC5 875 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 FAM50BQ9Y247 325 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 ACTL7BQ9Y614 415 aa13.87□□□□□ -0.19
DDX54-202ENST00000314045 PRPF4O43172 522 aaKnown RBP eCLIP13.86□□□□□ -0.19
DDX54-202ENST00000314045 CCNCP24863 283 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 PBLDP30039 288 aaPredicted RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 TPGS2Q68CL5 300 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 USP45Q70EL2 814 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 TTC7BQ86TV6 843 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 FAR2Q96K12 515 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 TMEM175Q9BSA9 504 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 FBXO6Q9NRD1 293 aaPredicted RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 DNAJB4Q9UDY4 337 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 CPQQ9Y646 472 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 TPP1O14773 563 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 TBC1D4O60343 1298 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 CLASP2O75122 1294 aaKnown RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 MLNP12872 115 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 HLA-DPA1P20036 260 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 SFSWAPQ12872 951 aaKnown RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 MARCH8Q5T0T0 291 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 KYAT3Q6YP21 454 aaKnown RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 ZNF572Q7Z3I7 529 aaPredicted RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 RTL3Q8N8U3 475 aaKnown RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 OR7D4Q8NG98 312 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 NOP53Q9NZM5 478 aaKnown RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 ZNF510Q9Y2H8 683 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 MYH10P35580 1976 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 CHUKO15111 745 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 FGF1P05230 155 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 DDX39BQ13838 428 aaKnown RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 FASTKD3Q14CZ7 662 aaKnown RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 TAF11Q15544 211 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 UPP1Q16831 310 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 LRRC8BQ6P9F7 803 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 FBXL19Q6PCT2 694 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 ZCCHC23Q6ZST2 131 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 ATXN2LQ8WWM7 1075 aaKnown RBP13.86□□□□□ -0.19
DDX54-202ENST00000314045 HDAC10Q969S8 669 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 SPDL1Q96EA4 605 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 GRHL1Q9NZI5 618 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 GJD2Q9UKL4 321 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 CHKBQ9Y259 395 aa13.86□□□□□ -0.19
DDX54-202ENST00000314045 PTGESO14684 152 aa13.85□□□□□ -0.19
DDX54-202ENST00000314045 GCATO75600 419 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms