RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 TMPRSS12Q86WS5 348 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 TRIM69Q86WT6 500 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 OXR1Q8N573 874 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 ATP11CQ8NB49 1132 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 TMIEQ8NEW7 156 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 PIP4K2CQ8TBX8 421 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 MDM1Q8TC05 714 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 CCDC114Q96M63 670 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 C2orf49Q9BVC5 232 aaPredicted RBP8.35□□□□□ -1.07
TPM3-203ENST00000312970 CHMP5Q9NZZ3 219 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 DKK4Q9UBT3 224 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 DACH1Q9UI36 760 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 DCTN4Q9UJW0 460 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 DMTF1Q9Y222 760 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 HS3ST2Q9Y278 367 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 PCDHGA4Q9Y5G9 962 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 PCDHGA1Q9Y5H4 931 aa8.35□□□□□ -1.07
TPM3-203ENST00000312970 PRAMEF26H0Y7S4 382 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 PES1O00541 588 aaKnown RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 ENC1O14682 589 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 BNIP3LO60238 219 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 RNGTTO60942 597 aaKnown RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 SRGAP2O75044 1071 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 MT-CO1P00395 513 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 RHOCP08134 193 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 FBXO45P0C2W1 286 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 SRCP12931 536 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 TFE3P19532 575 aaPredicted RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 MAT2AP31153 395 aaKnown RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 CHRNA3P32297 505 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 GGCXP38435 758 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 PPP2CBP62714 309 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 PPP2CAP67775 309 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 CYP4F3Q08477 520 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 SETMARQ53H47 684 aaPredicted RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 ALFQ53S48 1182 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 HSP90AA4PQ58FG1 418 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 CT47A1Q5JQC4 288 aaPredicted RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 C6orf118Q5T5N4 469 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 FAM102AQ5T9C2 384 aaPredicted RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 AGBL4Q5VU57 503 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 OTUD1Q5VV17 481 aaPredicted RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 NEK5Q6P3R8 708 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 DHRS13Q6UX07 377 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 Q6ZVU0 165 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 SPATS2Q86XZ4 545 aaKnown RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 XYLT1Q86Y38 959 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 MARCH9Q86YJ5 346 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 ZNF683Q8IZ20 524 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 EID2Q8N6I1 236 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 MSANTD4Q8NCY6 345 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 OR2A12Q8NGT7 310 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 KLHDC7BQ96G42 594 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 LRIG1Q96JA1 1093 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 CNDP2Q96KP4 475 aaKnown RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 HAPLN3Q96S86 360 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 TBCBQ99426 244 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 PSMB7Q99436 277 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 NAA15Q9BXJ9 866 aaKnown RBP8.34□□□□□ -1.07
TPM3-203ENST00000312970 STK33Q9BYT3 514 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 CLSTN2Q9H4D0 955 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 PREBQ9HCU5 417 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 ANLNQ9NQW6 1124 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 COL12A1Q99715 3063 aa8.34□□□□□ -1.07
TPM3-203ENST00000312970 IGLV3-10A0A075B6K4 115 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 A0A0D9SEW6 157 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 FAM149AA5PLN7 773 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 E9PAM4 449 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 I6L893 689 aaPredicted RBP8.33□□□□□ -1.08
TPM3-203ENST00000312970 K7ERQ8 282 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 KPNA3O00505 521 aaPredicted RBP8.33□□□□□ -1.08
TPM3-203ENST00000312970 SMAD6O43541 496 aaKnown RBP8.33□□□□□ -1.08
TPM3-203ENST00000312970 SNAP91O60641 907 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 RFPL3O75679 317 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 LSM8O95777 96 aaKnown RBP8.33□□□□□ -1.08
TPM3-203ENST00000312970 PRNPP04156 253 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 PRB1P04280 392 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 CTSLP07711 333 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 JUPP14923 745 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 UCHL3P15374 230 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 EPHA8P29322 1005 aaPredicted RBP8.33□□□□□ -1.08
TPM3-203ENST00000312970 OR1E1P30953 314 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 RECQLP46063 649 aaPredicted RBP8.33□□□□□ -1.08
TPM3-203ENST00000312970 TAS2R38P59533 333 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 SLC20A2Q08357 652 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 DPCR1Q3MIW9 517 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 POM121L1PQ3SYA9 428 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 TCP11X2Q5H9J9 407 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 TAF3Q5VWG9 929 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 RETSATQ6NUM9 610 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 ZNF783Q6ZMS7 281 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 ARCQ7LC44 396 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 CPA5Q8WXQ8 436 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 PIEZO2Q9H5I5 2752 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 DYRK4Q9NR20 520 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 SAMSN1Q9NSI8 373 aaKnown RBP8.33□□□□□ -1.08
TPM3-203ENST00000312970 MPP6Q9NZW5 540 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 NYNRINQ9P2P1 1898 aaKnown RBP8.33□□□□□ -1.08
TPM3-203ENST00000312970 VPS51Q9UID3 782 aa8.33□□□□□ -1.08
TPM3-203ENST00000312970 TMEM59LQ9UK28 342 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms