RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 CLOCKO15516 846 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 CLASP2O75122 1294 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 NDUFS2O75306 463 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 KRT1P04264 644 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 NAGAP17050 411 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 RPL34P49207 117 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 PIGHQ14442 188 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 GRIK4Q16099 956 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 BTBD8Q5XKL5 378 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 NUDCD3Q8IVD9 361 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 MZB1Q8WU39 189 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 MRPL45Q9BRJ2 306 aaKnown RBP9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 TMEM121Q9BTD3 319 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 ROPN1BQ9BZX4 212 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 ASB7Q9H672 318 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 ROPN1Q9HAT0 212 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 GBA2Q9HCG7 927 aaPredicted RBP9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 BRD7Q9NPI1 651 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 ARL8BQ9NVJ2 186 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 ZNHIT2Q9UHR6 403 aa9.69□□□□□ -0.86
RBFOX1-201ENST00000311745 FRMPD3Q5JV73 1810 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 GOLGA8QA0A0J9YX86 632 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 GOLGA8OA6NCC3 632 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 C2CD4BA6NLJ0 364 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 GOLGA8NF8WBI6 632 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 TMX2-CTNND1H3BSU7 103 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 GOLGA8RI6L899 631 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 RNASEH2AO75792 299 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 TRUB2O95900 331 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 NELFEP18615 380 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 TFE3P19532 575 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 KDELR1P24390 212 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 PEX2P28328 305 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 HOXC8P31273 242 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 CBX5P45973 191 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 RPS3AP61247 264 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 YWHAEP62258 255 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 KDSRQ06136 332 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 MOGQ16653 247 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 DUSP28Q4G0W2 176 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 MDH1BQ5I0G3 518 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 CYP20A1Q6UW02 462 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 METTL3Q86U44 580 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 CCDC28AQ8IWP9 274 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 SLC26A7Q8TE54 656 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 METTL2AQ96IZ6 378 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 ZFRQ96KR1 1074 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 ZSCAN5AQ9BUG6 496 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 CDH19Q9H159 772 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 ADNPQ9H2P0 1102 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 NPHS2Q9NP85 383 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 FETUBQ9UGM5 382 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 PHTF1Q9UMS5 762 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 RPL26L1Q9UNX3 145 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 FNDC1Q4ZHG4 1894 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 C1orf232A0A0U1RR37 186 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 H3BRB1 525 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 TNNC2P02585 160 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 THRAP10827 490 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 POLR2CP19387 275 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 GRM5P41594 1212 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 NDST1P52848 882 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 MLLT6P55198 1093 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 NFE2Q16621 373 aaPredicted RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 TRIM71Q2Q1W2 868 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 MORN1Q5T089 497 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 FNBP1LQ5T0N5 605 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 FBXL19Q6PCT2 694 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 LCLAT1Q6UWP7 414 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 RIPOR1Q6ZS17 1223 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 FAM183BPQ6ZVS7 135 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 PDSS2Q86YH6 399 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 NAT8LQ8N9F0 302 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 PCYOX1LQ8NBM8 494 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 KCTD4Q8WVF5 259 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 KBTBD7Q8WVZ9 684 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 SERPINB12Q96P63 405 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 THTPAQ9BU02 230 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 KATNAL1Q9BW62 490 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 MAGEB5Q9BZ81 275 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 RBM38Q9H0Z9 239 aaKnown RBP9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 FANCFQ9NPI8 374 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 RNF19AQ9NV58 838 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 ASIC3Q9UHC3 531 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 SOX13Q9UN79 622 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 CEPT1Q9Y6K0 416 aa9.68□□□□□ -0.86
RBFOX1-201ENST00000311745 A0A0G2JND7 137 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 ARHGAP42A6NI28 874 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 CFAP99D6REC4 459 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 BUD23O43709 281 aaKnown RBP9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 FGFR1P11362 822 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 ATF2P15336 505 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 GRK2P25098 689 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 MIPP30301 263 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 RAB15P59190 212 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 GNA12Q03113 381 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 TAP1Q03518 808 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 MMRN1Q13201 1228 aa9.67□□□□□ -0.86
RBFOX1-201ENST00000311745 TRPC3Q13507 836 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms