RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 SNX3O60493 162 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 RTN3O95197 1032 aaPredicted RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 AKAP5P24588 427 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 GEMP55040 296 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 CCNIQ14094 377 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 BOLA3Q53S33 107 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 MRNIPQ6NTE8 343 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ZCCHC23Q6ZST2 131 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 DNAAF5Q86Y56 855 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 B3GALNT2Q8NCR0 500 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SPPL2AQ8TCT8 520 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 MAGEE2Q8TD90 523 aaPredicted RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 KAT2BQ92831 832 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 FBXO32Q969P5 355 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 PGM2Q96G03 612 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SRPK1Q96SB4 655 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 CRNNQ9UBG3 495 aaPredicted RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 ING4Q9UNL4 249 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 TELO2Q9Y4R8 837 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 RAD54BQ9Y620 910 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 CCDC154A6NI56 674 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 MTRF1O75570 445 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 EOMESO95936 686 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 FGRP09769 529 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 MYL12AP19105 171 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 RPA3P35244 121 aaPredicted RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 SKIV2L2P42285 1042 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 FOLH1Q04609 750 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 FIGNQ5HY92 759 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 RNF43Q68DV7 783 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 LLGL2Q6P1M3 1020 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 TAF8Q7Z7C8 310 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 DHDDSQ86SQ9 333 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 TMEM86AQ8N2M4 240 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ZSWIM2Q8NEG5 633 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SUN5Q8TC36 379 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 BLOC1S5Q8TDH9 187 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 FBXO44Q9H4M3 255 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ITGA11Q9UKX5 1188 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 DMTF1Q9Y222 760 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 A0A1W2PRG6 482 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SSNA1O43805 119 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ALADP13716 330 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 CCNA2P20248 432 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 CASP4P49662 377 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 PYDC2Q56P42 97 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SLC45A4Q5BKX6 768 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 SAMD4BQ5PRF9 694 aaKnown RBP8.3□□□□□ -1.08
VPS41-202ENST00000310301 CAMK1DQ8IU85 385 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 FBXW8Q8N3Y1 598 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 BPIFB6Q8NFQ5 453 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 ITFG1Q8TB96 612 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 GGA2Q9UJY4 613 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 VPS9D1Q9Y2B5 631 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 NR2E1Q9Y466 385 aa8.3□□□□□ -1.08
VPS41-202ENST00000310301 COL2A1P02458 1487 aaPredicted RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 CASTOR2A6NHX0 329 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 MAFO75444 373 aaPredicted RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 DBTP11182 482 aaKnown RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 SLC25A3Q00325 362 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ARHGEF7Q14155 803 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 MYBPC2Q14324 1141 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 C10orf120Q5SQS8 335 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 SLC22A9Q8IVM8 553 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 HERC6Q8IVU3 1022 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 MTMR8Q96EF0 704 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 DCLK3Q9C098 648 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 NIF3L1Q9GZT8 377 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 GPAMQ9HCL2 828 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 TRNAU1APQ9NX07 287 aaKnown RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 CCDC167Q9P0B6 97 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ZMYM5Q9UJ78 669 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 C5P01031 1676 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 SOWAHBA6NEL2 793 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 PSMD11O00231 422 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ALDH1A2O94788 518 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ALOX5P09917 674 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 SLC2A4P14672 509 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ETS1P14921 441 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 GPC1P35052 558 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ANXA11P50995 505 aaKnown RBP8.29□□□□□ -1.08
VPS41-202ENST00000310301 CBX3Q13185 183 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 MPP3Q13368 585 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 ZNF792Q3KQV3 632 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 FBXO47Q5MNV8 452 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 PLPP4Q5VZY2 271 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 CDC73Q6P1J9 531 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 DCLRE1AQ6PJP8 1040 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 SLC39A5Q6ZMH5 540 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 MACC1Q6ZN28 852 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 TTC7BQ86TV6 843 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 FAM9CQ8IZT9 166 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 NPLOC4Q8TAT6 608 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 HELQQ8TDG4 1101 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 CKAP2Q8WWK9 683 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 BORCS5Q969J3 196 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 NACC2Q96BF6 587 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 TIFAQ96CG3 184 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 PHF21BQ96EK2 531 aa8.29□□□□□ -1.08
VPS41-202ENST00000310301 SENP2Q9HC62 589 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms