RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 OTUB2Q96DC9 234 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 LRRC39Q96DD0 335 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 OXNAD1Q96HP4 312 aaPredicted RBP22.93■■□□□ 1.26
IRF3-201ENST00000309877 FEM1AQ9BSK4 669 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 LRRC4CQ9HCJ2 640 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 OGFRQ9NZT2 677 aa22.93■■□□□ 1.26
IRF3-201ENST00000309877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.92■■□□□ 1.26
IRF3-201ENST00000309877 ABHD2P08910 425 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 GLDCP23378 1020 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 MAGEA3P43357 314 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 ZNF844Q08AG5 666 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 ADAM15Q13444 863 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 RFTN1Q14699 578 aaPredicted RBP22.92■■□□□ 1.26
IRF3-201ENST00000309877 CAPN12Q6ZSI9 719 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 TMEM25Q86YD3 366 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 FIBINQ8TAL6 211 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 WFDC5Q8TCV5 224 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 FGF13Q92913 245 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 LINC00597Q9H2U6 94 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 KIAA1522Q9P206 1035 aaPredicted RBP22.92■■□□□ 1.26
IRF3-201ENST00000309877 SEPT3Q9UH03 358 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 WNT6Q9Y6F9 365 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 TEX264Q9Y6I9 313 aa22.92■■□□□ 1.26
IRF3-201ENST00000309877 A0A087WUV0 522 aaPredicted RBP22.91■■□□□ 1.26
IRF3-201ENST00000309877 MT-CYBP00156 380 aaPredicted RBP22.91■■□□□ 1.26
IRF3-201ENST00000309877 CPP00450 1065 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 PHBP35232 272 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 SESN2P58004 480 aaPredicted RBP22.91■■□□□ 1.26
IRF3-201ENST00000309877 MAXP61244 160 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 NAPEPLDQ6IQ20 393 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 LINC00523Q86TU6 105 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 KLHDC8BQ8IXV7 354 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 KRT222Q8N1A0 295 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 DNAAF3Q8N9W5 541 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 IRF7Q92985 503 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 SH3GL2Q99962 352 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 CCDC77Q9BR77 488 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 CINPQ9BW66 212 aaPredicted RBP22.91■■□□□ 1.26
IRF3-201ENST00000309877 SPHK2Q9NRA0 654 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 GDE1Q9NZC3 331 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 MAD1L1Q9Y6D9 718 aa22.91■■□□□ 1.26
IRF3-201ENST00000309877 USP12O75317 370 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 SYF2O95926 243 aaKnown RBP22.9■■□□□ 1.26
IRF3-201ENST00000309877 MYZAPP0CAP1 466 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 TSHRP16473 764 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 RGS19P49795 217 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 FAM78AQ5JUQ0 283 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 CES5AQ6NT32 575 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 IGDCC3Q8IVU1 814 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 OR52K1Q8NGK4 314 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 SMARCD2Q92925 531 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 WDR83Q9BRX9 315 aaKnown RBP22.9■■□□□ 1.26
IRF3-201ENST00000309877 BBS2Q9BXC9 721 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 POLR1EQ9GZS1 481 aaKnown RBP22.9■■□□□ 1.26
IRF3-201ENST00000309877 PIH1D1Q9NWS0 290 aaKnown RBP22.9■■□□□ 1.26
IRF3-201ENST00000309877 CDH22Q9UJ99 828 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 OR51B4Q9Y5P0 310 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 TRANK1O15050 2925 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 LAMA3Q16787 3333 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 SDR42E2A6NKP2 422 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 NEDD8-MDP1E9PL57 170 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 H3BQF6 201 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 AP3B1O00203 1094 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 SNAP91O60641 907 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 VIPR2P41587 438 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 MPP3Q13368 585 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 OLIG2Q13516 323 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 KRT71Q3SY84 523 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 ATAT1Q5SQI0 421 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 RNF43Q68DV7 783 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 C3orf62Q6ZUJ4 267 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 CROCCP2Q86T23 111 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 PGBD5Q8N414 524 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 IPMKQ8NFU5 416 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 IMP4Q96G21 291 aaKnown RBP22.9■■□□□ 1.26
IRF3-201ENST00000309877 SIGLEC10Q96LC7 697 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 ASB16Q96NS5 453 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 TBL1YQ9BQ87 522 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 C2orf49Q9BVC5 232 aaPredicted RBP22.9■■□□□ 1.26
IRF3-201ENST00000309877 ZC3H7BQ9UGR2 993 aaKnown RBP22.9■■□□□ 1.26
IRF3-201ENST00000309877 CLEC4EQ9ULY5 219 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 ACTL7AQ9Y615 435 aa22.9■■□□□ 1.26
IRF3-201ENST00000309877 MYO18AQ92614 2054 aaKnown RBP22.89■■□□□ 1.25
IRF3-201ENST00000309877 PMPCBO75439 489 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 PENKP01210 267 aaPredicted RBP22.89■■□□□ 1.25
IRF3-201ENST00000309877 CD86P42081 329 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 GPX6P59796 221 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 DSC2Q02487 901 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 NIPAL4Q0D2K0 466 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 LMAN2Q12907 356 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 STAT4Q14765 748 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 LRIT3Q3SXY7 679 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 EP400NLQ6ZTU2 488 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 ADGRG2Q8IZP9 1017 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 AGGF1Q8N302 714 aaeCLIP22.89■■□□□ 1.25
IRF3-201ENST00000309877 KIAA1958Q8N8K9 716 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 DCAF4L2Q8NA75 395 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 ALG14Q96F25 216 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 CFAP36Q96G28 342 aa22.89■■□□□ 1.25
IRF3-201ENST00000309877 EBNA1BP2Q99848 306 aaKnown RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms