RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 SNRPD1P62314 119 aaKnown RBP18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 DYNLT1P63172 113 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 GBE1Q04446 702 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 PPIDQ08752 370 aaKnown RBP18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 BYSLQ13895 437 aaKnown RBP18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 HNRNPDQ14103 355 aaKnown RBP18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 GRM3Q14832 879 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 PKN3Q6P5Z2 889 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 LINGO4Q6UY18 593 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 OR8D1Q8WZ84 308 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 LRIG1Q96JA1 1093 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 PBKQ96KB5 322 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 NAP1L3Q99457 506 aaPredicted RBP18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
SSSCA1-201ENST00000309328 TCRBV21S2A2A0A5A6 115 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 USP27XA6NNY8 438 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 TTC34A8MYJ7 566 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 MATN3O15232 486 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 TMCC1O94876 653 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 IGSF6O95976 241 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 MT-CO1P00395 513 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 TUBB4AP04350 444 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 DNA2P51530 1060 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 SATB1Q01826 763 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 RAD51Q06609 339 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 RALGPS1Q5JS13 557 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 C9orf64Q5T6V5 341 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 MARC1Q5VT66 337 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 FAM46CQ5VWP2 391 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 CCDC13Q8IYE1 715 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 SLC35F6Q8N357 371 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 CCNYQ8ND76 341 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 GDAP1L1Q96MZ0 367 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 CINPQ9BW66 212 aaPredicted RBP18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 HEMGNQ9BXL5 484 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 PRSS16Q9NQE7 514 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 MFHAS1Q9Y4C4 1052 aa18.22■□□□□ 0.51
SSSCA1-201ENST00000309328 WASH3PC4AMC7 463 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 J3KR12 359 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 MCF2LO15068 1137 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 ZNF217O75362 1048 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 NEBLO76041 1014 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 CD160O95971 181 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 PRNPP04156 253 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 HLA-EP13747 358 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 TCP1P17987 556 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 CES1P23141 567 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 WASP42768 502 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 CSNK1DP48730 415 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 RHOAP61586 193 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 NSUN2Q08J23 767 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 CCDC15Q0P6D6 951 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 ZNF235Q14590 738 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 LBRQ14739 615 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 TTC31Q49AM3 519 aaPredicted RBP18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 CARD16Q5EG05 197 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 DCAF12L1Q5VU92 463 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 ZNF776Q68DI1 518 aaPredicted RBP18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 TMEM92Q6UXU6 159 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 RASSF3Q86WH2 238 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 OR2AP1Q8NGE2 309 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 TFB1MQ8WVM0 346 aaKnown RBP18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 PTPRN2Q92932 1015 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 PSKH2Q96QS6 385 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 RSPH9Q9H1X1 276 aaPredicted RBP18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 CD248Q9HCU0 757 aa18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 BCCIPQ9P287 314 aaKnown RBP eCLIP18.21■□□□□ 0.51
SSSCA1-201ENST00000309328 CTAGE9A4FU28 777 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 C1QTNF3-AMACRE9PGA6 284 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 K7ESF4 209 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 SIN3BO75182 1162 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 POP4O95707 220 aaKnown RBP18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 ADH1BP00325 375 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 PRLRP16471 622 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 MMP13P45452 471 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 SLC10A2Q12908 348 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 KLF1Q13351 362 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 ZNF211Q13398 564 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 NOMO1Q15155 1222 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 ANGPT1Q15389 498 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 Q6ZVU0 165 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 C11orf74Q86VG3 221 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 SLC13A5Q86YT5 568 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 TEX26Q8N6G2 289 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 MAML1Q92585 1016 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 PRCCQ92733 491 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 PPP1R16AQ96I34 528 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 VAT1Q99536 393 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 OSBPL1AQ9BXW6 950 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 ZDHHC4Q9NPG8 344 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 HOMER3Q9NSC5 361 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 TTC7AQ9ULT0 858 aaPredicted RBP18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 CHD5Q8TDI0 1954 aa18.2■□□□□ 0.5
SSSCA1-201ENST00000309328 K7ERQ8 282 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 SMAD6O43541 496 aaKnown RBP18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 ACADMP11310 421 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 CCNB1P14635 433 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 CNR2P34972 360 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 AP1S1P61966 158 aa18.19■□□□□ 0.5
SSSCA1-201ENST00000309328 IFI35P80217 286 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms